Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq13 114 2e-21 >seq13 Length=3315884 Score = 114 bits (126), Expect = 2e-21 Identities = 179/256 (70%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||| || || ||||| |||||||||||||| | |||| |||||||| || Sbjct 368939 CGCGATAACATTCAGGGCATCACAAAGCCAGCTATCCGCAGGTTGGCGCGTCGTGGAGGC 368998 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || || | | || || ||| | |||||||| ||||||| ||| | ||| | ||||| Sbjct 368999 GTGAAAAGAATTTCGGGCTTGATTTATGAAGAAATTCGTGGTGTACTCAAGGTGTTCCTT 369058 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| | | ||| | || || | || || || ||||| | |||||||| || Sbjct 369059 GAGAACATCATCAAGGACTCTGTAACGTACACAGAACACGCACGCAGAAAGACTGTGACG 369118 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| || ||||| | |||| || |||||| | | |||| ||||| || || Sbjct 369119 GCCATGGACATTGTCTACTCCCTGAAGCGCCAAGGCAGAACCCTTTACGGTTTCGGTGGT 369178 Query 16697 TAATCTTCTAATCAAA 16712 ||| | || | || || Sbjct 369179 TAAACATCCAGTCGAA 369194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072583253366