Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq32 114 1e-20 seq1 89.7 5e-13 seq50 82.4 7e-11 >seq32 Length=1241728 Score = 114 bits (126), Expect = 1e-20 Identities = 211/305 (69%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 ||| |||| | ||||||||||| || |||| |||||| | || || || || ||| Sbjct 911913 ACGTATGACGCGCTATGGAATGCAGCGCAGCAGCAGCTAATGAGGGAAGGAAAGATGCAC 911854 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || || || || ||||||||||| || ||||| || ||||||| || | || | || Sbjct 911853 GGCTATCTGCGTATGTACTGGGCGAAGAAGATGCTGGAGTGGATGAAATCGCCTGCTGAG 911794 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || || | | |||| || | || |||| |||||| || ||||| ||||| ||| Sbjct 911793 GCACTTGCGGGAGCTATACATTTGAATGATAAATACAGCCTGGACGGGACGGATCCCAAC 911734 Query 71852 GGTTATGTCGGTTGCATGTGGAGCATTTGCGG-TCTTCACGATAGAAGCTTTT--TAGAA 71908 ||||| ||||| ||||||||| | | |||| ||| |||| | ||| ||| ||| Sbjct 911733 GGTTACGTCGGATGCATGTGG-TCGATCGCGGCTCTGCACG--ACCAGCCTTTCAGAGAG 911677 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 | | | | ||| || || | |||||||| ||||||| || | ||||||||| Sbjct 911676 AGACCCATATATGGGAAGGTTAGGTATATGAACTACGCTGGTTGCCAAAGGAAGTTCAAT 911617 Query 71969 GTGAA 71973 || || Sbjct 911616 GTAAA 911612 >seq1 Length=9216672 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || || | |||||| | ||| | || | | Sbjct 4066369 ATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACCATCACCCTGGAAGTTGAGGCTTCC 4066310 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || ||||||| ||||| || ||||| || ||||| || Sbjct 4066309 GACACTATTGAAAATGTGAAGGCAAAGATTCAAGACAAGGAGGGGATCCCCCCCGACCAG 4066250 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||| | || |||||||||||| ||||| | |||| || |||||| ||| Sbjct 4066249 CAGAGGCTCATCTTCGCCGGCAAACAACTGGAAGACGGCAGAACTCTCTCCGACTACAAC 4066190 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || || || ||||| || | ||||| || Sbjct 4066189 ATCCAGAAGGAATCCACCCTTCATCTCGT 4066161 >seq50 Length=657131 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || |||||| | ||||| || | ||||| | || | || | Sbjct 306821 AAAATGCAGATCTTCGTGAAAACACTGACTGGGAAGACTATCACTTTGGAGGTGGAGCCC 306762 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||| || ||||| | || || || || ||||| |||||||| || |||||| Sbjct 306761 TCCGATACGATCGAAAACGTGAAGGCGAAAATCCAAGACAAGGAAGGGATTCCACCCGAT 306702 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| | || || | || ||||| || || ||||||| |||| | ||| || Sbjct 306701 CAACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCAGAACGTTGTCCGATTAC 306642 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || |||||||| | || |||||||| Sbjct 306641 AACATCCAGAAGGAATCTACGCTTCACCTGGTCCT 306607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478645275852640