Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq50 125 6e-24 >seq50 Length=657131 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || ||||||||||| || | ||| ||| | Sbjct 306134 ATGCAAATTTTTGTGAAAACCCTTACAGGAAAAACCATCACACTAGAAGTAGAGCCGTCT 306075 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | || || || || |||||| |||||||||||| |||| ||| || Sbjct 306074 GATAC-GATCGAGAATGTGAAGGCTAAAATTCAAGATAAAGAAGGCATCCCTCCTGACCA 306016 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || || || || | ||| || ||||| | ||||||| || ||| | | || || || Sbjct 306015 ACAGAGGCTGATCTTTGCAGGGAAACAGCTGGAAGATGGCAGAACACTATCGGACTACAA 305956 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| || ||||||||| | ||| ||||||||||||| ||||| || Sbjct 305955 CATTCAGAAGGAGTCTACTCTTCATTTGGTGTTGAGATTACGAGGTGG 305908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || || ||| | || || || || || || | ||| |||| | Sbjct 306590 ATGCAAATTTTCGTGAAGACGTTGACCGGGAAGACGATAACGTTGGAAGTGGAGCCGTCG 306531 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || || ||| ||||||| || || ||||| | || || || Sbjct 306530 GACAC-GATAGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGTATTCCGCCAGACCA 306472 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||||| ||| || || ||| | || || | | ||| || ||||||| || Sbjct 306471 ACAACGTCTTATTTTTGCAGGAAAGCAACTGGAGGACGGAAGAACGTTGTCCGATTACAA 306412 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| ||||| || || | || |||| | ||||||| ||||||| Sbjct 306411 CATTCAGAAAGAATCAACACTTCACTTGGTACTTCGATTGCGTGGAGGAA 306362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425329163735440