Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq50 89.7 4e-13 >seq50 Length=657131 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| || || ||| ||||||| || || || || ||||| ||| || Sbjct 306590 ATGCAAATTTTCGTGAAGACGTTGACCGGGAAGACGATAACGTTGGAAGTGGAGCCGTCG 306531 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | || ||| ||||||| ||||| ||||| |||| || ||| Sbjct 306530 GACACGATAGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGTATTCCGCCAGACCAA 306471 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||||| ||| || || ||| |||| || | ||| || ||||||| || Sbjct 306470 CAACGTCTTATTTTTGCAGGAAAGCAACTGGAGGACGGAAGAACGTTGTCCGATTACAAC 306411 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || |||||||| ||||| || || || | || |||| || || Sbjct 306410 ATTCAGAAAGAATCAACACTTCACTTGGTACTTCGATTGCGTGGAGG 306364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423025244100400