Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq54 100 5e-16 >seq54 Length=544971 Score = 100 bits (110), Expect = 5e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| ||||||||| ||||| || ||| | ||| ||||| ||||| || || || | Sbjct 190731 GCCAAGTTGCAGACAGCCACTTCATCCTTGCTGGCGTACTCAACAATTTCTGTACATAAA 190790 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || || | ||||||||||| |||| || || ||| ||| ||||||||||||||| Sbjct 190791 TTGCTACCTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTG 190850 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGC 244842 || | |||| | ||| ||| ||||||| ||| || Sbjct 190851 TACATCATGTACGGCGTCCCTGTCTCGATCTGAGC 190885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944305416265120