Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq54 136 2e-27 >seq54 Length=544971 Score = 136 bits (150), Expect = 2e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| | ||||| || | ||||||||||||| ||| ||| | ||||||||||||| Sbjct 191140 ACTCTTTCCATGAAAAGGTCTGGAATCCACAAAGCACCAAAGAGATCTCTCGCTCTCCGC 191199 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 |||||||| ||||| || || ||| |||| || ||||| || || | ||||| || Sbjct 191200 TCTTCTTTGCCGTGGTTTTTCCTTAAGTCTAGAAAGTCAAATATGTCGTAATGCCAAGGC 191259 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 || | ||| | ||| || || |||||||| ||||| || || ||||| ||||||||||| Sbjct 191260 TCGAGATACACAGCCAAGCTTCCTTTTCTCTTTCCACCTCCCTGATCCACGTATCTTGCT 191319 Query 26105 GTTTCATTGAAAACT 26119 | || ||||||||| Sbjct 191320 GCATCGTTGAAAACT 191334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253031173806650