Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcocystis_20neurona_20[genbank_20GCA_5F000875885.1_202015-02-13] 2,862 sequences; 130,023,008 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq32 120 5e-22 >seq32 Length=1241728 Score = 120 bits (132), Expect = 5e-22 Identities = 203/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 |||||| ||||| || ||||| | |||||||||||| | || ||| | ||||| Sbjct 911928 CTCGAAGCAGCAGAGACGTATGACGCGCTATGGAATGCAGCGCAGCAGCAGCTAATGAGG 911869 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 |||||||| ||||| | | | | || ||||||||||| || ||||| || || |||| Sbjct 911868 GAAGGAAAGATGCACGGCTATCTGCGTATGTACTGGGCGAAGAAGATGCTGGAGTGGATG 911809 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | | | || | || || ||| | | ||| || |||| |||| ||| || || Sbjct 911808 AAATCGCCTGCTGAGGCACTTGCGGGA-GCTATACATTTGAATGATAAATACAGCCTGGA 911750 Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGAT-TACACGATA 183232 ||| |||||||| ||||| ||||| || || |||||||| | | |||| | | ||||| Sbjct 911749 CGGGACGGATCCCAACGGTTACGTCGGATGCATGTGGTCGA-TCGCGGCTCTGCACGACC 911691 Query 183233 GAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTA 183281 | | | ||| ||||| |||| ||| ||| | || |||||||| || Sbjct 911690 AGCCTTTCAGAGAGAGACCCATATATGGGAAGGTTAGGTATATGAACTA 911642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903378880464320