Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1688 107 4e-18 seq26 104 5e-17 seq2584 98.7 2e-15 seq2312 98.7 2e-15 seq2226 98.7 2e-15 seq2016 98.7 2e-15 seq1995 98.7 2e-15 seq1927 98.7 2e-15 seq1017 98.7 2e-15 seq877 98.7 2e-15 seq566 98.7 2e-15 seq8 98.7 2e-15 >seq1688 Length=67426 Score = 107 bits (118), Expect = 4e-18 Identities = 75/85 (88%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 165700 TAAAACGCTT---GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGT 165756 ||||| |||| ||||||||||||||||||||||||||| || || |||| || ||||| Sbjct 45643 TAAAAAGCTTTAAGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGT 45702 Query 165757 CGTGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||||| ||||| Sbjct 45703 CGTGGGTTCGAGCCCCACGGTGGGC 45727 Score = 107 bits (118), Expect = 4e-18 Identities = 75/85 (88%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 165700 TAAAACGCTT---GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGT 165756 ||||| |||| ||||||||||||||||||||||||||| || || |||| || ||||| Sbjct 45827 TAAAAAGCTTTAAGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGT 45886 Query 165757 CGTGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||||| ||||| Sbjct 45887 CGTGGGTTCGAGCCCCACGGTGGGC 45911 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 46032 GCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAGC 46091 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 46092 CCCACGGTGGGC 46103 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 46340 GCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAGC 46399 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 46400 CCCACGGTGGGC 46411 >seq26 Length=25960 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 16285 GCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAGC 16226 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16225 CCCACGGTGGGC 16214 >seq2584 Length=109774 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 94765 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 94824 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 94825 CCCACGGTGGGC 94836 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 97516 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 97575 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 97576 CCCACGGTGGGC 97587 >seq2312 Length=38535 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 9192 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 9251 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 9252 CCCACGGTGGGC 9263 >seq2226 Length=42183 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 15762 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 15821 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 15822 CCCACGGTGGGC 15833 >seq2016 Length=51820 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 2834 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 2893 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2894 CCCACGGTGGGC 2905 >seq1995 Length=135329 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 11911 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 11852 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 11851 CCCACGGTGGGC 11840 >seq1927 Length=56085 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 28211 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 28270 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 28271 CCCACGGTGGGC 28282 >seq1017 Length=84501 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 40488 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 40429 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 40428 CCCACGGTGGGC 40417 >seq877 Length=8645 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 3772 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 3831 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3832 CCCACGGTGGGC 3843 >seq566 Length=13827 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 3682 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 3623 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3622 CCCACGGTGGGC 3611 >seq8 Length=26482 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 22329 GCCCGTCTAGCTCAGATGGTAGAGCGCAAGGCTTTTAACCTTGTGGTCGTGGGTTCGAGC 22270 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22269 CCCACGGTGGGC 22258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057788381743640