Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1842 185 6e-42 >seq1842 Length=60065 Score = 185 bits (204), Expect = 6e-42 Identities = 429/638 (67%), Gaps = 34/638 (5%) Strand=Plus/Minus Query 101666 GTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTA 101725 || || || |||||||| | ||||| || | | ||| | |||| |||||| ||| | Sbjct 52370 GTTAATTGGATTTTAAGTGGCTCAATATGGTTTGTATAAACATGAGTATCTCCAATAACA 52311 Query 101726 TGGATAAACTCTCCAGGCACTAGATTAGTGACA----TGAGCAATCATGCAAGTTAAAAG 101781 || | || || || || | ||| ||| |||||||| | ||| ||||| || Sbjct 52310 TGAACGAAGTCACCT----CTTTGTAAGTCACAAACTTGAGCAATTAAGCATGTTAATAG 52255 Query 101782 AGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAG 101841 || ||||| |||| ||||| || || ||||| |||||||| ||||||| ||||||| Sbjct 52254 TGAGTAGCTTGCAACATTAAAAGGAACGCCTAAACCCATATCGCCTGATCTCTGATACAT 52195 Query 101842 TTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATACATGACAAGGCGGCAA 101901 | ||| || ||||||| ||| |||| || | | ||||| ||||| ||||| Sbjct 52194 AAGGCAGTTGAGTTTTCCATTTTCTACAAAAAACTGGCAAAGAACATGGCAAGGAGGCAA 52135 Query 101902 CACCATTTTAGGAATGTCTGAAAC-----ATTCCAAGCACACATTAACATCCTTCT---A 101953 |||| |||| ||| | ||||||||||| ||||| || | | | Sbjct 52134 AGCCATA-----AATGGTTGAGATTTAGGATTCCAAGCACTCATTACTATACGACGTGAA 52080 Query 101954 TCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAAT-TGGTCAACTCCTTCTCC 102012 || ||| | |||||||||| | ||| |||| | || || |||||||||| Sbjct 52079 TC---AGGATCTGTTTTTATAAGTTTAAT-AACTTCTGCAAGCTGATCAACTCCTTGGTT 52024 Query 102013 TTTATAATC-GCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071 | |||| || || || | ||||||| ||||| ||||| ||||| || || || | Sbjct 52023 TGTATAGTCAGCATTCAT-ATTAGTATATTCAGCTCCAAAATGTCTCCATTGGAAACCGT 51965 Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131 | || || || |||||||| | ||||| |||| ||| || ||||||||||| || | Sbjct 51964 AAACTGGCCCTAGATCTCCAACTTCTCTATCATTAAAGCCGAGTTTATCTAAGAAATCCC 51905 Query 102132 TAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAG 102191 || |||||| |||||||| || || || || || || || || | || Sbjct 51904 TACTTCCATTTGCATCCCAGATATGGACACCTTTAGCACTTAATTCATTAGCATTTGTGC 51845 Query 102192 ATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAG 102251 |||||| |||||||| || ||||||||||| || || ||||||| ||| || || | Sbjct 51844 TTCCTCTAATAAACCATAAGAGTTCTTCAACCACTGCTTTCCAAAACACTAATTTTGTTG 51785 Query 102252 TTAAAAGTGGAAATTCATTTTC---TAAACTAAACCTA 102286 | || | ||| || | |||| ||||||| ||||| Sbjct 51784 TAAATATTGGGAA---AGTTTCTGATAAACTATACCTA 51750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361239629575628