Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1842 159 2e-34 >seq1842 Length=60065 Score = 159 bits (176), Expect = 2e-34 Identities = 429/650 (66%), Gaps = 12/650 (2%) Strand=Plus/Minus Query 97051 TCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACT 97110 ||||| || || ||||| |||| |||||| | | |||| || || || | Sbjct 52349 TCAATATGGTTTGTATAAACATGAGTATCTCCAATAACATGAACGAAGTCACCTCTTTGT 52290 Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 || ||| || || || || | || |||||||| || ||||| |||| |||||||| Sbjct 52289 AAGTCACAAACTTGAGCAATTAAGCATGTTAATAGTGAGTAGCTTGCAACATTAAAAGGA 52230 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC 97230 || |||| |||||||| ||||||| ||||| | | ||| || ||||||| Sbjct 52229 ACGCCTAAACCCATATCGCCTGATCTCTGATACATAAGGCAGTTGAGTTTTCCATTTTCT 52170 Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGA--ACATCTAAGA 97288 ||| ||||||| | | ||||| || || ||||| ||||| ||| | || || || Sbjct 52169 ACAAAAAACTGGCAAAGAACATGGCAAGGAGGCAAAGCCATAAATGGTTGAGATTTAGGA 52110 Query 97289 CATTCCAAGCACACATCAACATTCTTCT---ATCGGTTGGGTTTGTGTGTATGGTATTAA 97345 |||||||||| ||| | || | | ||| | | | ||| | ||| |||| Sbjct 52109 --TTCCAAGCACTCATTACTATACGACGTGAATCAG---GATCTGTTTTTATAAGTTTAA 52055 Query 97346 TTATCTGCTTTAAT-TGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATAT 97404 | | || || || |||||||| |||| ||| | || | | |||| Sbjct 52054 TAA-CTTCTGCAAGCTGATCAACTCCTTGGTTTGTATAGTCAGCATTCATATTAGTATAT 51996 Query 97405 TCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTA 97464 || ||||||||||| ||||||||||| || ||||| || || || ||||| |||||||| Sbjct 51995 TCAGCTCCAAAATGTCTCCATTGGAAACCGTAAACTGGCCCTAGATCTCCAACTTCTCTA 51936 Query 97465 TCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA 97524 ||| || || || |||||||| | |||| ||||||||||||||| || || ||| Sbjct 51935 TCATTAAAGCCGAGTTTATCTAAGAAATCCCTACTTCCATTTGCATCCCAGATATGGACA 51876 Query 97525 CCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCC 97584 || || | || || | || |||||| |||||||| || | |||||| Sbjct 51875 CCTTTAGCACTTAATTCATTAGCATTTGTGCTTCCTCTAATAAACCATAAGAGTTCTTCA 51816 Query 97585 ACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCTG 97644 || || || ||||||| ||| || ||||| || | || ||| | | ||| || Sbjct 51815 ACCACTGCTTTCCAAAACACTAATTTTGTTGTAAATATTGGGAAAGTTTCTGATAAACTA 51756 Query 97645 TATCTAGACTGCATTCCAAAAACACTCAATGTTCCAACTCCTGTTCTGTC 97694 || ||| | | | || |||||||| || || || ||| ||| || || Sbjct 51755 TACCTACTCATCCTCCCGAAAACACTAAAAGTCCCTACTTTTGTCCTATC 51706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346772892941960