Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1842 165 7e-36 >seq1842 Length=60065 Score = 165 bits (182), Expect = 7e-36 Identities = 415/624 (67%), Gaps = 5/624 (1%) Strand=Plus/Plus Query 20044 TTTCCCT-TATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| |||| || || ||| || |||||||||| || |||||||| | ||||| Sbjct 51771 TTTCCCAATATTTACAACAAAATTAGTGTTTTGGAAAGCAGTGGTTGAAGAACTCTTATG 51830 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 |||||||| |||| |||||| ||| || | | ||||| || | || ||| Sbjct 51831 GTTTATTAGAGGAAGCACAAATGCTAATGAATTAAGTGCTAAAGGTGTCCATATCTGGGA 51890 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGA 20222 ||| ||||| || | | || ||| | | || ||| | | | ||| || || Sbjct 51891 TGCAAATGGAAGTAGGGATTTCTTAGATAAACTCGGCTTTAATGATAGAGAAGTTGGAGA 51950 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 | | || || || || || || ||||||||||||||||||||||||||| | | ||||| Sbjct 51951 TCTAGGGCCAGTTTACGGTTTCCAATGGAGACATTTTGGAGCTGAATATACTAATATGAA 52010 Query 20283 CACAAATTATTTTGGACAAGGAGTAGATCA-ATTACAAAATGTTATTAATTTAATTAAAA 20341 | | ||| |||||||| ||||| || || || |||||||| | || |||| Sbjct 52011 TGCTGACTATACAAACCAAGGAGTTGATCAGCTTGCAGAA-GTTATTAAACTTATAAAAA 52069 Query 20342 C-GAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 | || || | || | | || | | | || ||||| ||||| | || || Sbjct 52070 CAGATCCTGATTCAC-GTCGTATAGTAATGAGTGCTTGGAATCCTAAATCTCAACCATTT 52128 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 |||||||||||||| || ||| | || ||||| |||| || | ||| || | Sbjct 52129 ATGGCTTTGCCTCCTTGCCATGTTCTTTGCCAGTTTTTTGTAGAAAATGGAAAACTCAAC 52188 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || | |||||||| |||| | |||||||| | || |||||||| ||| ||||||| Sbjct 52189 TGCCTTATGTATCAGAGATCAGGCGATATGGGTTTAGGCGTTCCTTTTAATGTTGCAAGC 52248 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTC 20580 || | || | || | | ||||| || ||| || ||| ||| |||||||| || Sbjct 52249 TACTCACTATTAACATGCTTAATTGCTCAAGTTTGTGACTTACAAAGAGGTGACTTCGTT 52308 Query 20581 CACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTA 20640 || || ||||| | ||| |||| || ||||| || || | ||| | || ||| Sbjct 52309 CATGTTATTGGAGATACTCATGTTTATACAAACCATATTGAGCCACTTAAAATCCAATTA 52368 Query 20641 ACACGACAACCAAAACAATTCCCA 20664 || |||| ||| | | ||||||| Sbjct 52369 ACTAGACATCCACACCCATTCCCA 52392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171214635460