Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2191 118 8e-22 seq1753 118 8e-22 seq1 116 3e-21 seq1993 114 1e-20 seq2223 107 1e-18 seq1260 107 1e-18 seq1008 96.9 3e-15 seq1581 84.2 2e-11 seq156 84.2 2e-11 >seq2191 Length=126925 Score = 118 bits (130), Expect = 8e-22 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| || |||| |||||| ||||| |||||||| ||||||||||| || | ||| | Sbjct 117389 AGTCTGAGGACCAAGTGAAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCAAGGGTTCTT 117330 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| ||||| ||||| ||| ||||||||||||||||||| || | ||||||| Sbjct 117329 CCATCTTCTAATTGCTTGCCTGCAAAGATAAGTCTTTGTTGATCAGGAGGAATGCCTTCC 117270 Query 18228 TTATC 18232 || || Sbjct 117269 TTGTC 117265 Score = 109 bits (120), Expect = 4e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 18119 CATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAA 18178 || |||||| ||||| |||||||| ||||||||||| || | ||| | | |||||| || Sbjct 117606 CAAGTGAAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCAAGGGTTCTTCCATCTTCTAA 117547 Query 18179 TTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAAT 18238 ||| ||||| ||| ||||||||||||||||||| || | ||||| || || ||| Sbjct 117546 TTGCTTGCCGGCAAAGATAAGTCTTTGTTGATCAGGAGGAATTCCTTCTTTGTCTTGAAT 117487 Query 18239 TTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGC 18297 || | || ||||| | | | | | | || | ||| |||| || || |||| | Sbjct 117486 TT-TGGCTTTGACATTTTCGATACTATCTGAAGACTCAACATCAAGTGTTATAGTTTTTC 117428 Query 18298 CGGTCAATGTTTTTACAAAAATTTGCATT 18326 | || | ||| || ||||| ||||||||| Sbjct 117427 CTGTAAGTGTCTTGACAAAGATTTGCATT 117399 >seq1753 Length=65450 Score = 118 bits (130), Expect = 8e-22 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 |||||||| |||| || | |||||| |||||||| ||||| || || |||| || || Sbjct 9662 AGTCTAAGAACCAAATGTAATGTTGACTCTTTTTGGATGTTATAATCAGCCAAAGTCCTA 9603 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||||||||||||| || || ||||||| |||||||| || ||| | ||||| Sbjct 9602 CCATCTTCCAATTGTTTTCCAGCGAAGATAAGCCTTTGTTGGTCTGGGGGAATACCTTCT 9543 Query 18228 TTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286 ||||| ||||| | || ||||| | | ||| | |||| | |||| |||| || Sbjct 9542 TTATCTTGAATTT-TGGCTTTGACATTTTCAATACTGTCTGAAGACTCGACGTCAAGTGT 9484 Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||| || || | ||||| ||||| || ||||| Sbjct 9483 TATAGTTTTTCCTGTAAGGGTTTTGACAAAGATCTGCAT 9445 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 ||||| || | || | ||||| || |||||||||||||| || |||| ||| | | | Sbjct 10115 CTAAGAACTAAATGCAAAGTTGACTCCTTTTGAATGTTGTAATCAGCCAAAGTTCTTCCA 10056 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 || || | |||||| || ||| ||||||||||||||||||| ||| | ||||| ||| Sbjct 10055 TCCTCAAGTTGTTTTCCTGCAAAGATAAGTCTTTGTTGATCAGGGGGGATACCTTCTTTA 9996 Query 18231 TCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || |||| | || ||||| | | ||| | | ||| | ||| |||| ||||| Sbjct 9995 TCTTGGATTT-TAGCTTTGACATTTTCAATACTATCAGAAGACTCAACATCAAGTGTGAT 9937 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| || ||||| ||||| ||||| |||||||| Sbjct 9936 AGTTTTTCCAGTCAAAGTTTTAACAAAGATTTGCAT 9901 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | ||||| || || | ||| | |||||| |||||||||||||||||||| || Sbjct 9443 CCTCCTCTGAGTCTGAGGACTAAGTGTAATGTTGACTCTTTTTGAATGTTGTAGTCAGCT 9384 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | |||||| | ||| ||||| ||| | ||||| ||||||||||| || Sbjct 9383 AAGGTCCTTCCATCTTCAAGTTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGAGGA 9324 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || |||| | || ||||| | | | |||| | ||| Sbjct 9323 ATACCTTCTTTGTCTTGGATTT-TAGCTTTGACGTTCTCTATGCTGTCTGAAGACTCTAC 9265 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || | ||||| ||||||| || | |||||| || || || ||||||||| Sbjct 9264 ATCTAAAGTGATTGTTTTGCCTGTGAGTGTTTTAACGAAGATCTGCATTTTT 9213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | || |||||| |||| ||| | ||||| |||||||| ||||| || || ||| Sbjct 9899 CCTCCTCTTAATCTAAGAACCAAGTGTAAAGTTGACTCTTTTTGGATGTTATAATCAGCC 9840 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | |||||| | ||||| || ||| | ||||| ||||||||||| || Sbjct 9839 AAAGTCCTTCCATCTTCAAGCTGTTTTCCAGCAAATATAAGCCTTTGTTGATCTGGAGGA 9780 Query 18219 ACGCCTTCCTTATC 18232 | ||||| ||||| Sbjct 9779 ATACCTTCTTTATC 9766 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 18092 TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTA 18151 || ||| || || | |||||||| || | ||||| || || ||||| ||||| || || Sbjct 10362 TTATTAGCCACCTCTAAGTCTAAGAACTAAATGAAGAGTCGACTCTTTCTGAATATTATA 10303 Query 18152 GTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || || | ||| | | |||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 10302 ATCAGCTAAGGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAATATAAGTCTTTGCTGATC 10243 Query 18212 CACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGG 18270 || | ||||| ||||| |||| | || || || | | ||| | | || | Sbjct 10242 AGGAGGAATTCCTTCTTTATCTTGTATTT-TAGCTTTCACATTTTCAATACTATCGGATG 10184 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| |||| || || |||| || ||||| || || |||||||| ||||| Sbjct 10183 ACTCCACATCAAGAGTAATAGTTTTTCCAGTCAAAGTCTTAACAAAAATCTGCAT 10129 >seq1 Length=265894 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 || || || || ||||| || || | || ||||||||||| || |||||||| ||||| Sbjct 160850 TAGCCACCACGAAGTCTGAGGACTAAATGGAGTGTTGATTCCTTCTGAATGTTATAGTCA 160791 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 || | ||| | | ||||||||||||||| || ||| | |||||||| |||||||| | Sbjct 160790 GCTAAGGTTCTGCCATCTTCCAATTGTTTCCCGGCAAAAATAAGTCTCTGTTGATCAGGG 160731 Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTC 18274 || | ||||||||||| ||| | | || || || | | ||| ||||| | || Sbjct 160730 GGGATTCCTTCCTTATCTTGAATCT-TAGCTTTAACATTTTCAATGCTGTCAGATGATTC 160672 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| |||| || || || || || ||||| |||||||| Sbjct 160671 AACATCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAATATTTGCAT 160621 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| || || | |||||| |||||||| ||||||||||| ||||| || Sbjct 160391 CCACCGCGGAGTCTGAGGACTAAGTGAAGGGTTGATTCCTTTTGAATGTTATAGTCAGCT 160332 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || ||| |||||| ||||| || || || ||||||||||||| ||||| || Sbjct 160331 AAAGTCCTACCATCTTCTAATTGCTTTCCGGCGAAGATAAGTCTTTGCTGATCTGGAGGG 160272 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||| || ||| | ||| || | ||| |||| | ||| Sbjct 160271 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACGTTCTCAATGCTGTCCGAAGACTCAACA 160212 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||||||| | ||||| || | ||||| || || ||||||||| Sbjct 160211 TCGAGGGTGATGGTCTTGCCTGTAAGGGTTTTGACGAATATTTGCATT 160164 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| || || | ||||||||| ||||| || |||||||||||||| || Sbjct 160619 CCACCGCGGAGTCTGAGGACTAAGTGAAGTGTGGATTCCTTCTGAATGTTGTAGTCAGCA 160560 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||||| |||||||| || || |||||||||| |||||||| || Sbjct 160559 AGGGTTCTTCCGTCTTCTAATTGTTTCCCAGCGAAGATAAGTCTCTGTTGATCAGGAGGG 160500 Query 18219 ACGCCTTCCTTATC 18232 | ||||| ||||| Sbjct 160499 ATACCTTCTTTATC 160486 >seq1993 Length=52953 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || |||| ||| || || | ||||| ||||||||||||||||||||||| || || Sbjct 24311 CCGCCACGTAATCTGAGGACTAAATGAAGGGTTGATTCTTTTTGAATGTTGTAATCAGCA 24252 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| || |||||| | |||||| || || |||| |||||||||||||| ||| Sbjct 24251 AGAGTTCGACCATCTTCAAGTTGTTTACCAGCGAAGATCAGTCTTTGTTGATCAGGGGGG 24192 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| ||||| ||||| ||| || | ||| |||| | ||| Sbjct 24191 ATTCCTTCTTTATCTTGAATTTTGGCCTTTACGTTCTCAATGCTGTCGGAAGATTCGACA 24132 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||||||| | || || || || ||||| || || ||||||||| Sbjct 24131 TCGAGGGTGATGGTCTTTCCTGTTAAGGTTTTGACGAAGATTTGCATT 24084 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||||||||||| |||||||||||||| || || |||| || ||| Sbjct 24756 TCTTAGAACCAAATGAAGTGTTGACTCTTTTTGAATGTTATAATCAGCCAAAGTCCTACC 24697 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| || ||||| || ||| | |||||||| |||||||| || | ||||| || Sbjct 24696 ATCTTCTAACTGTTTACCAGCAAAAATAAGTCTCTGTTGATCAGGAGGGATTCCTTCTTT 24637 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| ||||| | || || || | | ||| | | ||| | || || | || | Sbjct 24636 ATCCTGAATTT-TCGCTTTAACATTTTCAATACTATCAGAAGATTCAACATCCAAAGTAA 24578 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 | |||| || |||||||| || |||||||| |||||| Sbjct 24577 TAGTTTTTCCAGTCAATGTCTTGACAAAAATCTGCATT 24540 Score = 104 bits (114), Expect = 2e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| ||||||||||||||||| || || || || | |||| ||| |||||| |||||| Sbjct 24515 TGAAGAGTTGATTCTTTTTGAATATTATAATCAGCAAGTGTTCTACCATCTTCTAATTGT 24456 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| ||| | ||||||||||||||||| || | ||||| ||||| Sbjct 24455 TTGCCAGCAAATATAAGTCTTTGTTGATCTGGAGGGATACCTTCTTTATC 24406 >seq2223 Length=42303 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 18092 TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTA 18151 || ||| || || | |||||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct 21392 TTATTAGCCACCTCTAAGTCTAAGAACCAAGTGAAGAGTTGACTCTTTCTGAATGTTGTA 21451 Query 18152 GTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || || | ||| | | |||||| | |||||| || ||| | || |||||||||||||| Sbjct 21452 ATCAGCTAAGGTTCTCCCATCTTCAAGTTGTTTTCCGGCAAATATGAGTCTTTGTTGATC 21511 Query 18212 CACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGG 18271 ||| | ||||| || || || | ||| || | | ||| | ||| | Sbjct 21512 AGGGGGAATTCCTTCTTTGTCTTGTATCTTAGCCTTTACATTTTCAATGCTATCAGATGA 21571 Query 18272 CTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| |||| || || |||| || ||||| || || |||||||| ||||| Sbjct 21572 CTCCACATCAAGAGTAATAGTTTTTCCAGTCAAAGTCTTAACAAAAATCTGCAT 21625 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| || || | ||| | |||||| |||||||||||||||||||| |||| ||| | Sbjct 22092 AGTCTGAGAACTAAGTGCAATGTTGACTCTTTTTGAATGTTGTAGTCAGCCAAGGTTCTT 22151 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| | ||||||||| || ||||||| ||||||||||| || | ||||| Sbjct 22152 CCATCTTCTAGTTGTTTGCCAGCGAAGATAAGCCTTTGTTGATCTGGAGGAATACCTTCT 22211 Query 18228 TTATC 18232 ||||| Sbjct 22212 TTATC 22216 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| || |||| ||| | ||||| ||||||||||| |||||||| |||| ||| | Sbjct 22320 AGTCTGAGGACCAAGTGCAAAGTTGACTCTTTTTGAATATTGTAGTCAGCCAAGGTTCTT 22379 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| | ||||||||| || ||||||| ||||||||||| || | ||||| Sbjct 22380 CCATCTTCTAGTTGTTTGCCAGCGAAGATAAGCCTTTGTTGATCTGGAGGAATACCTTCT 22439 Query 18228 TTATC 18232 ||||| Sbjct 22440 TTATC 22444 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | ||||| || |||| ||| | ||||| |||||||| ||||||||||| ||| Sbjct 22539 CCTCCTCTAAGTCTGAGGACCAAGTGCAAAGTTGACTCTTTTTGGATGTTGTAGTCAGCC 22598 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | ||| | | |||||| | ||||||||| ||| |||| | |||||||| || Sbjct 22599 AAGGTTCTTCCATCTTCAAGTTGTTTGCCTGCAAAGATTAACCTTTGTTGGTC 22651 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | | |||||| |||| || | |||||| ||||||||||| || || || || Sbjct 21627 CCTCCTCTCAATCTAAGAACCAAATGCAATGTTGACTCTTTTTGAATATTATAATCAGCT 21686 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||| || | ||| || || ||| ||||||||||||| ||||| ||| Sbjct 21687 AAAGTTCTTCCATCCTCAAGTTGCTTTCCTGCAAAGATAAGTCTTTGCTGATCAGGGGGA 21746 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| |||| | || ||||| | | | | | | || | || Sbjct 21747 ATTCCTTCTTTATCTTGGATTT-TGGCTTTGACATTTTCGATACTATCTGAAGATTCAAC 21805 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| |||| || || || || || |||||||| ||||| Sbjct 21806 ATCAAGTGTGATAGTTTTTCCAGTTAAAGTCTTAACAAAAATCTGCAT 21853 >seq1260 Length=79673 Score = 107 bits (118), Expect = 1e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| || || | |||||| ||||| |||||||| |||||||| || || | ||| | Sbjct 62874 AGTCTGAGGACTAAGTGAAGAGTTGACTCTTTTTGGATGTTGTAATCAGCAAGGGTTCTT 62933 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| ||||| ||||| ||| ||||||| ||||||||||| || | |||||| Sbjct 62934 CCATCTTCTAATTGCTTGCCTGCAAAGATAAGCCTTTGTTGATCAGGAGGAATGCCTTCT 62993 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 || || ||| | | ||| || | | | | | ||| | ||| || | ||| Sbjct 62994 TTGTCTTGAATCTTTGCCTTAACGTTTTCGATGCTATCAGATGACTCAACATCTAGGGTT 63053 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || | ||||| || | |||||| || || |||||||| ||| Sbjct 63054 ATTGTCTTGCCTGTGAGTGTTTTAACGAAGATTTGCATGTTT 63095 Score = 102 bits (112), Expect = 6e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 18092 TTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTA 18151 || ||| || || | ||||| || || | || ||||||||||||||||||||||| || Sbjct 62402 TTATTAGCCACCTCTCAGTCTCAGCACTAAATGTAGTGTTGATTCTTTTTGAATGTTATA 62461 Query 18152 GTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 || || | |||| | | |||||| ||||| ||||| ||| | ||||||||||| ||||| Sbjct 62462 ATCAGCAAGTGTTCTCCCATCTTCTAATTGCTTGCCTGCAAAAATAAGTCTTTGCTGATC 62521 Query 18212 CACGGGCACGCCTTCCTTATC 18232 || | |||||| || || Sbjct 62522 AGGAGGGATGCCTTCTTTGTC 62542 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | |||||||||||| | || | ||||||||||||||| ||||| ||||| || Sbjct 62637 CCTCCTCTTAGTCTAAGTACTAAATGCAATGTTGATTCTTTTTGGATGTTATAGTCAGCA 62696 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||| ||||| ||||| || || | ||||||||||| ||||| || Sbjct 62697 AGAGTTCTTCCATCCTCCAACTGTTTTCCAGCGAAAATAAGTCTTTGCTGATCTGGTGGA 62756 Query 18219 ACGCCTTCCTTATC 18232 | ||||| ||||| Sbjct 62757 ATCCCTTCTTTATC 62770 >seq1008 Length=7107 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | ||||| || || | ||| | |||||| |||||||||||||||||||| || Sbjct 7100 CCTCCTCTGAGTCTGAGGACTAAGTGTAATGTTGACTCTTTTTGAATGTTGTAGTCTGCT 7041 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | |||||| | ||| ||||| ||| | ||||| ||||||||||| || Sbjct 7040 AAGGTCCTTCCATCTTCAAGTTGCTTGCCAGCAAAAATAAGCCTTTGTTGATCTGGAGGA 6981 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || |||| | || ||||| | | | |||| | ||| Sbjct 6980 ATACCTTCTTTGTCTTGGATTT-TAGCTTTGACATTCTCTATGCTGTCTGAAGACTCTAC 6922 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 || | ||||| ||||||| || | |||||| || || || ||||||||| Sbjct 6921 ATCTAAAGTGATTGTTTTGCCTGTGAGTGTTTTAACGAAGATCTGCATTTTT 6870 >seq1581 Length=69860 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| | ||||| |||||| |||||||||||||||||||| ||||| || | ||| | Sbjct 28557 AGTCTTAATACCAAGTGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGCTAAGGTTCTT 28616 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | |||||| | || || || ||| ||||||| | || ||||| Sbjct 28617 CCATCTTCTAGCTGCTTTCCTGCAAAGATAAGGCGCTGCTGATC 28660 >seq156 Length=23114 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| | ||||| ||||| |||||||||||||||||||| ||||| || | ||| | Sbjct 22148 AGTCTTAATACCAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGCTAAGGTTCTT 22207 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | |||||| | || || || ||| ||||||| | ||| ||||| Sbjct 22208 CCATCTTCTAGCTGCTTTCCTGCAAAGATAAGACGTTGCTGATC 22251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379331850085860