Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2522 82.4 1e-11 >seq2522 Length=30114 Score = 82.4 bits (90), Expect = 1e-11 Identities = 177/265 (67%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||||||| | | | | || || ||||||||||||||||| || ||||| || | Sbjct 25034 AAGCGTCATAGGAAAATTGCCCGTGAAAACATCCAAGGAATCACAAAACCAGCAATTAGA 25093 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGT 16555 | || || | | ||||| || || | | || |||||||||||||| |||| || Sbjct 25094 AGACTTGCAAGAAGAGGTGGTGTTAAAAGATTATCCGGATTGGTCTATGATGAGACCCGC 25153 Query 16556 GATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCAC 16615 |||| |||| |||| | | || || ||||| || ||||| ||||| Sbjct 25154 AATGTCCTGAAATCCTTCTTGGAAGGTATTGTCAGAGATGCAGTCACATATACTGAGCAT 25213 Query 16616 GCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGT 16675 || | | | ||||| || || | | ||| | | ||||||||||| | |||||| | Sbjct 25214 GCAAGAAGAAAGACAGTAACAGCACTCGATGTTATTTATGCATTGAAGAGACAAGGCAGA 25273 Query 16676 AAGATTTATGGTTTTGGAAGTTAAT 16700 | | || ||||||||| | |||| Sbjct 25274 ACCTTATACGGTTTTGGAGGCTAAT 25298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072797201204