Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1688 102 2e-16 seq26 102 2e-16 >seq1688 Length=67426 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 45655 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAG 45714 Query 142563 CCCCAC 142568 |||||| Sbjct 45715 CCCCAC 45720 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 45839 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAG 45898 Query 142563 CCCCAC 142568 |||||| Sbjct 45899 CCCCAC 45904 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 46031 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAG 46090 Query 142563 CCCCAC 142568 |||||| Sbjct 46091 CCCCAC 46096 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 46339 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAG 46398 Query 142563 CCCCAC 142568 |||||| Sbjct 46399 CCCCAC 46404 >seq26 Length=25960 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 16286 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGTGGGTTCGAG 16227 Query 142563 CCCCAC 142568 |||||| Sbjct 16226 CCCCAC 16221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027802191450148