Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2191 98.7 8e-16 seq1260 86.0 5e-12 >seq2191 Length=126925 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| ||||||| | | ||||| ||| || || ||| ||||| ||||| || |||| Sbjct 117871 AACCACCTCTCAATCTTAACACCAAATGTAGTGTTGACTCTTTCTGGATGTTATAGTCTG 117812 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | | || | | || || ||||||||||| ||||| || || | ||||||||| | Sbjct 117811 CAAGTGTTCTCCCATCTTCTAATTGCTTGCCTGCAAAAATAAGTCTCTGCTGATCAGGGG 117752 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGC 34078 | | | ||||| || ||||||| ||||| | |||||| | ||| || Sbjct 117751 GAATTCCTTCTTTATCTTGAATTTTTGCCTTAACATTTTCAATACTATCTGAAGACTCTA 117692 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | ||||||||||| || || || || || |||||||||||||| Sbjct 117691 CATCTAGAGTTATTGTTTTGCCTGTAAGAGTCTTAACAAAGATTTGCAT 117643 >seq1260 Length=79673 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| ||||| || | || || | ||||| || ||| || || ||||||||||| || Sbjct 62864 ACCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGACTCTTTTTGGATGTTGTAATCAGC 62923 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || || ||||||||||| ||||| || || | || ||||| || Sbjct 62924 AAGGGTTCTTCCATCTTCTAATTGCTTGCCTGCAAAGATAAGCCTTTGTTGATCAGGAGG 62983 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || |||||||| ||| ||| ||||| | | ||||||| || || Sbjct 62984 AATGCCTTCTTTGTCTTGAATCTTTGCCTTAACGTTTTCGATGCTATCAGATGACTCAAC 63043 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTAATAT 34136 || | |||||||| || || || |||||||| || ||||||||||| ||| |||| Sbjct 63044 ATCTAGGGTTATTGTCTTGCCTGTGAGTGTTTTAACGAAGATTTGCATGTTTTATAT 63100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397049682587656