Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq125 82.4 9e-11 >seq125 Length=105080 Score = 82.4 bits (90), Expect = 9e-11 Identities = 240/364 (66%), Gaps = 13/364 (4%) Strand=Plus/Plus Query 114896 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCC 114952 ||||| || ||||| ||||| || || || || | ||| || || | | ||| | Sbjct 73322 ATATCAGCATGCCAAGGTTCAAGATAAACAGCAAATGATCCTTTTCTTTTTCCCCCACCT 73381 Query 114953 TGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGAT 115012 || | |||||| || ||||| |||||||||| | ||||||||| | | ||||| ||| Sbjct 73382 TGATCTACATATCTTGCTGTATCATTAAATACTCTAAGCATTGGTACAAGACCATTAGAA 73441 Query 115013 TGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCATGGATGTGCATAC 115070 || ||||| || || | ||| | ||| || ||||| | || ||| | |||| Sbjct 73442 TGACCATTAGTACCTCTTATATAA--CTTCCTGATGCTCTAATATTATGTACACTAATAC 73499 Query 115071 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGT 115130 ||||||| ||||| | ||||| || | || || | | | | |||||||||| | Sbjct 73500 CAATACCACCTGCACTTTTTGATATAAGAGCACATTGTTTTAATGTATCGTAGATCCCTT 73559 Query 115131 CGATCGAGTCACCCTTATTTGCGATA---AGGAAGCAGCTCGACATTTGTGGCCTTGGTG 115187 |||| | | | | | ||| ||| | || || |||||||| |||| | Sbjct 73560 CGAT--ACT-ATCTTCTTTTAACATAATTAAAAAACAAGATGACATTTGATTGTTTGGAG 73616 Query 115188 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGT 115247 |||| | ||| || |||||||| || || || | ||| || |||| ||| |||| Sbjct 73617 TACCTGAGTTAAAAAGGGTTGGGGTTGCATGAGTAAACCAACGTTGGCTCATTAGTTCGT 73676 Query 115248 AGGT 115251 |||| Sbjct 73677 AGGT 73680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597333976934240