Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq521 156 4e-33 seq149 145 8e-30 >seq521 Length=94946 Score = 156 bits (172), Expect = 4e-33 Identities = 309/455 (68%), Gaps = 2/455 (0%) Strand=Plus/Plus Query 93907 TTCAACGCGGGGACCCCGGTGCCA-CAGATGTCTTCGTGTTTCCTGATGACGAACAAGGC 93965 ||||| | ||||| || ||| | ||||||||||| || ||| || | | || | | Sbjct 24952 TTCAATTCAGGGACTCCT-TGCAATCAGATGTCTTCATGCTTCTTGTTAATGATGCAAGA 25010 Query 93966 CGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGC 94025 ||||| || ||| |||| || | || ||| | || || ||| |||| || Sbjct 25011 TGACTCAATAGACGGTATTTATGAAACACTAAAGCAATGCGCTCTAATCAGTAAATGGGC 25070 Query 94026 GGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTAC 94085 ||||| || || | ||||| ||| || || | || | ||| || ||||| || || Sbjct 25071 TGGGGGTATAGGCTTAAGTGTTCACAACATAAGAGCAACATCTTCTTATATCCGTGGAAC 25130 Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145 |||||| | ||| || || || || |||||||| | || ||||| | | || || || Sbjct 25131 CAATGGAAACTCAAATGGTCTTGTGCCTATGCTTAGAGTATTCAATGATACAGCTCGTTA 25190 Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205 || ||||| ||||| |||| ||| || || | || || || ||||| ||||| ||||| Sbjct 25191 TGTAGACCAAGGTGGGGGGAAGAGAAAAGGAGCATTTGCTGTTTATCTTGAGCCTTGGCA 25250 Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265 || ||| | | ||| | | ||| | ||||| || || || | | || Sbjct 25251 TGCTGACATTTTTGAGTTCTTAAAACTGAAACTCAACCATGGAAAAGAAGAACATCGAGC 25310 Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325 |||||| || || |||||||||||| | || || |||||||||||| | || || |||| Sbjct 25311 CAGAGATCTTTTTTACGCTCTCTGGATCCCTGATCTTTTTATGAAAAGAGTTGAAGAAAA 25370 Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTC 94360 | | |||||| ||| | ||||| ||| |||||| Sbjct 25371 CGGAGACTGGAGCCTTATGTGTCCTAATCAATGTC 25405 >seq149 Length=23196 Score = 145 bits (160), Expect = 8e-30 Identities = 317/468 (68%), Gaps = 14/468 (3%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCA-CAGATGTCTTCGTG---TTTCCTGAT 93953 || ||| ||||||| | ||||| || ||| | |||||||||||||| ||| | || Sbjct 610 CCAACCTTGTTCAATTCAGGGACTCCT-TGCAATCAGATGTCTTCGTGCTTTTTAGTAAT 552 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 || | |||| ||||| || || |||| ||| | || ||| | ||||| || Sbjct 551 GATG--CAAGAT-GACTCTATAGATGGTATTTACGAAACACTGAAGCAGTGTGCTTTAAT 495 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 | |||| || || || || || | || || ||| || || | || | |||||| Sbjct 494 CAGCAAATGGGCTGGAGGTATAGGCTTAAGCGTTCACAACATAAGAGCAACATCTTCCTA 435 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||||| ||||||||||| | ||| || ||||| || ||||||||| | || || || | Sbjct 434 TATCCGTGGTACCAATGGAAACTCAAATGGCCTGGTACCTATGCTCAGAGTTTTTAATGA 375 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | || || || || || || ||||| |||| || || || | || || || ||||| Sbjct 374 TACAGCTCGTTATGTAGATCAAGGTGGAGGGAAAAGAAAAGGAGCATTTGCTGTTTATCT 315 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGCAA 94250 ||||| ||||| || || | | ||| | | || |||| ||||| || || Sbjct 314 TGAGCCTTGGCATGCTGATATTTTTGAATTCCTAAAACT---AAAGCTCAACCATGGGAA 258 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | || || |||||||| || ||||| || ||| | || || ||||||||||| Sbjct 257 AGAAGAACATAGAGCTAGAGACCTTTTTTACGCCCTGTGGATTCCTGATCTTTTTATGAA 198 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATG 94358 | | || || |||| | |||||||||| | ||||| ||| |||| Sbjct 197 AAGAGTTGAAGAAAATGGAGACTGGAGTCTTATGTGTCCTAATCAATG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706948342880