Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq521 86.0 1e-11 >seq521 Length=94946 Score = 86.0 bits (94), Expect = 1e-11 Identities = 219/331 (66%), Gaps = 2/331 (1%) Strand=Plus/Minus Query 205048 CATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCAT 205107 ||| ||||| |||||||||||| || || || |||| || ||||| || || Sbjct 25473 CATACCTTGTTGCTCGTATTTTGTATAGAGAGCATCAAATTCTTCGCCGTATACATCACA 25414 Query 205108 CAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCT 205166 || ||| |||||| || |||||||| || ||| ||| | |||| || || | Sbjct 25413 AAGACCTTGACATTGATTAGGACACATAAGGCTCCA-GTCTCCGTTTTCTTCAACTCTTT 25355 Query 205167 CCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGT 205226 |||||| || || |||||| || ||||||| ||||| | ||| | | | | || | Sbjct 25354 TCATAAAAAGATCAGGGATCCAGAGAGCGTAAAAAAGATCTCTGGCTCGATGTTCTTCTT 25295 Query 205227 CTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACC 205286 |||| |||| ||||| | | | | |||||| || ||||| ||||| | Sbjct 25294 TTCCATGGTTGAGTTTCAGTTTTAAGAACTCAAAAATGTCAGCATGCCAAGGCTCAAGAT 25235 Query 205287 ACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGT 205346 | || || | ||| ||| ||||| |||||| ||||| || |||| | | | Sbjct 25234 AAACAGCAAATGCTCCTTTTCTCTTCCCCCCACCTTGGTCTACATAACGAGCTGTATCAT 25175 Query 205347 TGAAAACTCGCAGCATCGGCACCAGACCGTT 205377 |||| |||| ||||| ||||| ||||| || Sbjct 25174 TGAATACTCTAAGCATAGGCACAAGACCATT 25144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795129079151680