Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2223 116 4e-21 seq1753 111 2e-19 seq1008 107 2e-18 seq1260 98.7 1e-15 seq1 98.7 1e-15 seq2191 93.3 4e-14 seq2459 91.5 1e-13 seq114 86.0 6e-12 >seq2223 Length=42303 Score = 116 bits (128), Expect = 4e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38237 TaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 38296 |||||| ||||| || ||||| ||||| ||||| ||||| || |||||| | || ||||| Sbjct 22772 TAAAAACATGCAGATCTTCGTTAAAACACTCACAGGCAAGACAATCACCTTAGATGTCGA 22713 Query 38297 GGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 | | | || ||| | | | | |||| ||||||| |||||||| || ||||| | Sbjct 22712 GTCTTCAGATAGCATCGAGAATGTCAAAGCTAAAATCCAAGACAAAGAAGGTATTCCTCC 22653 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 |||||||| || | || | || |||||||| || || || | | ||| | || Sbjct 22652 AGACCAACAAAGGTTAATCTTTGCAGGCAAACAACTTGAAGATGGAAGAACCTTGGCTGA 22593 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||||||||||||| || | || |||| ||||| || Sbjct 22592 CTACAACATCCAAAAAGAGTCAACTTTGCACTTGGTCCT 22554 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| || |||||||| || | ||||| || || | Sbjct 22309 ATGCAGATCTTCGTCAAAACCCTCACAGGAAAAACCATAACACTTGACGTTGAATCCTCA 22250 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||||| | | ||||| |||||| ||||||| || ||||| || ||||| | || || Sbjct 22249 GACAGCATTGAAAACG-TTAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCA 22191 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| |||||||| || || || | | ||| | |||||||| Sbjct 22190 ACAAAGGCTTATCTTCGCTGGCAAACAACTAGAAGATGGAAGAACCTTGGCTGACTACAA 22131 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| ||||| || | || |||| || || || Sbjct 22130 CATTCAAAAAGAGTCAACATTGCACTTAGTTCT 22098 >seq1753 Length=65450 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 ||||||||||| || ||||| ||||| ||||| |||||||| ||||| | || || ||| Sbjct 9211 AAAAAAATGCAGATCTTCGTTAAAACACTCACAGGCAAAACAATCACTTTAGATGTAGAG 9270 Query 38298 GCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 | | |||||| | | |||| | |||| ||||||| |||||||| || ||||| | Sbjct 9271 TCTTCAGACAGCATAGAGAACG-TCAAAGCTAAAATCCAAGACAAAGAAGGTATTCCTCC 9329 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 || ||||| |||| |||| || ||||| || || || || | | ||| | || Sbjct 9330 AGATCAACAAAGGCTTATTTTTGCTGGCAAGCAACTTGAAGATGGAAGGACCTTAGCTGA 9389 Query 38417 CTACAACATCCAAAAGGA 38434 ||||||||| ||||| || Sbjct 9390 CTACAACATTCAAAAAGA 9407 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || || ||||| || || | ||||||||| | | Sbjct 9445 ATGCAGATCTTTGTCAAAACCCTTACAGGAAAAACTATAACACTTGACGTCGAGTCTTCA 9504 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 ||||| | ||| | |||| ||||| | || ||||| || |||||| | |||||| Sbjct 9505 GACAGTATTGAAAATGTCAAAGCCAAAATTCAAGATAAAGAAGGTATTCCCCCAGACCAA 9564 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| || | ||| || ||||| |||| || | | || | || || ||| Sbjct 9565 CAAAGGCTTATCTTCGCTGGAAAACAATTGGAAGATGGTAGGACTTTGGCTGATTATAAC 9624 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||| || | || | |||||||| || Sbjct 9625 ATCCAAAAAGAGTCAACATTACATTTGGTTCT 9656 >seq1008 Length=7107 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 ||||||||||| || ||||| ||||| ||||| |||||||| ||||| | || || ||| Sbjct 6868 AAAAAAATGCAGATCTTCGTTAAAACACTCACAGGCAAAACAATCACTTTAGATGTAGAG 6927 Query 38298 GCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | | |||||| | | | | |||| ||||||| |||||||| || ||||| | Sbjct 6928 TCTTCAGACAGCATAGAGAATGTCAAAGCTAAAATCCAAGACAAAGAAGGTATTCCTCCA 6987 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || ||||| |||| |||| || ||||| || || || || | | ||| | ||| Sbjct 6988 GATCAACAAAGGCTTATTTTTGCTGGCAAGCAACTTGAAGATGGAAGGACCTTAGCAGAC 7047 Query 38418 TACAACATCCAAAAGGA 38434 |||||||| ||||| || Sbjct 7048 TACAACATTCAAAAAGA 7064 >seq1260 Length=79673 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 38239 aaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| |||||||| ||||| ||||| ||||| ||||| || || ||| | || || ||| Sbjct 63096 AAAACATGCAAATCTTCGTTAAAACACTCACAGGCAAGACAATAACCCTAGATGTTGAGT 63037 Query 38299 CCACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | | || ||| | | ||||| |||| | ||| || | |||||||| || ||||| | Sbjct 63036 CATCTGATAGCATCGAAAACG-TTAAGGCAAAGATTCAAGACAAAGAAGGCATTCCTCCT 62978 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || ||||| |||| || | || ||||| || | || || | | ||||| || Sbjct 62977 GATCAACAAAGGCTTATCTTTGCAGGCAAGCAATTAGAAGATGGAAGAACCCTTGCTGAT 62918 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||||||||| || | || || || || || || Sbjct 62917 TACAACATCCAAAAAGAGTCAACTCTTCACTTAGTCCT 62880 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || ||||| || || || || || | || || || | | Sbjct 62863 ATGCAAATATTTGTTAAGACTCTCACAGGAAAGACAATAACTCTAGATGTAGAATCTTCT 62804 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || ||| | ||| |||||| ||||||| || ||||| || ||||| | || || Sbjct 62803 GATAGCATTGAAAATGTTAAAGCCAAAATCCAGGATAAAGAAGGGATTCCACCAGATCAG 62744 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || |||| ||| || |||||| |||| || | | || || ||||| ||| Sbjct 62743 CAAAGACTTATTTTCGCTGGAAAACAGTTGGAGGATGGAAGAACTCTTGCTGACTATAAC 62684 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||| ||| | || ||||||| || || Sbjct 62683 ATCCAAAAAGAATCAACATTGCATTTAGTACT 62652 >seq1 Length=265894 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||| || |||||| | || || ||| | | Sbjct 160393 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAGACTATCACCTTAGATGTTGAGTCTTCA 160452 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||||| | ||| |||| | || |||| || ||||| || || || | || ||| Sbjct 160453 GACAGCATTGAAAATGTTAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCTGATCAA 160512 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | || || | ||| || ||||| | || |||| | ||||| ||||||||| Sbjct 160513 CAGAGACTTATCTTCGCTGGGAAACAATTAGAAGACGGAAGAACCCTTGCTGACTACAAC 160572 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || || |||||| | || || || || || || Sbjct 160573 ATTCAGAAGGAATCCACACTTCACTTAGTCCT 160604 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||| || || || | || || ||||||||||| | || || || | | Sbjct 160621 ATGCAAATATTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGATGTTGAATCATCT 160680 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||||| | ||| |||||| || || | || || || ||||| ||| | || ||| Sbjct 160681 GACAGCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCCCCTGATCAA 160740 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC-GACTACAA 38422 ||| | || |||| || || ||||| |||| || | || | ||| | | ||||| || Sbjct 160741 CAGAGACTTATTTTTGCCGGGAAACAATTGGAAGATG-GCAGAACCTTAGCTGACTATAA 160799 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| || |||||| | || || ||||| || || Sbjct 160800 CATTCAGAAGGAATCAACACTCCATTTAGTCCT 160832 >seq2191 Length=126925 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38237 TaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 38296 |||||| ||||| || ||||| ||||| ||||| || || || || ||| | || || || Sbjct 117165 TAAAAATATGCAGATCTTCGTTAAAACACTCACAGGAAAGACAATAACCTTAGATGTTGA 117224 Query 38297 GGCCACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCG 38355 | | | || ||| | | ||||| |||||| || || | ||||| || || ||||| Sbjct 117225 GTCATCTGATAGCATCGAAAACG-TTAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTC 117283 Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 | || ||||| | || || | || ||||| || | || || | | ||||| | Sbjct 117284 CTGATCAACAAAGACTTATCTTTGCAGGCAAGCAATTAGAAGATGGAAGAACCCTTGCTG 117343 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||||||||||||| || | || || || ||||| || Sbjct 117344 ACTACAACATCCAAAAAGAGTCAACCCTTCACTTGGTCCT 117383 >seq2459 Length=32074 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| || || || || ||||| || || || || || | || || ||| | Sbjct 25744 AAATATGCAAATTTTTGTTAAGACACTCACAGGAAAGACGATAACTTTAGATGTAGAGTC 25685 Query 38300 CACCGA--CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | || || || |||| | |||| |||||||| || ||||| |||||||| | Sbjct 25684 TTCTGATTCAAT-TGAGAACG-TAAAAGCAAAAATCCAAGATAAAGAAGGAATTCCTCCT 25627 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 || || ||||| || || | || || || ||||| || || | | ||| | ||| Sbjct 25626 GATCAGCAGCGCCTAATCTTTGCAGGAAAGCAGCTTGAAGATGGAAGAACCTTAGCTGAC 25567 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||||| ||| |||| || |||||||| | | || ||||| || Sbjct 25566 TACAACATTCAAAAAGAATCGACTCTCCATTTGGTCTTAAGATTAAGAGGTGG 25514 >seq114 Length=105167 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| || || || || || || || || || || || | || || ||| | Sbjct 3678 AAATATGCAAATTTTTGTTAAGACTCTTACAGGAAAGACGATAACTTTAGATGTAGAGTC 3619 Query 38300 CACCGA--CAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC 38357 | || || || |||| | || | |||||||| |||||||| |||||||| | Sbjct 3618 TTCTGATTCAAT-TGAGAACG-TGAAGGCAAAAATCCAAGACAAAGAAGGAATTCCTCCA 3561 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| ||||| || || | || || || ||||| || || | | ||| | || Sbjct 3560 GACCAGCAGCGCCTAATCTTTGCAGGAAAGCAGCTTGAAGATGGAAGAACCTTAGCTGAT 3501 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| ||| |||| || || ||||| | | || ||||| || Sbjct 3500 TACAACATCCAAAAAGAATCGACTCTTCACTTGGTCTTAAGATTAAGAGGTGG 3448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500156369323520