Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq521 132 6e-26 seq149 100 4e-16 >seq521 Length=94946 Score = 132 bits (146), Expect = 6e-26 Identities = 443/679 (65%), Gaps = 19/679 (3%) Strand=Plus/Plus Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || || ||||| | || ||||| | || || | |||| || | |||| || ||| Sbjct 25009 GATGACTCAATAGACGGTATTTATGAAACACTAAAGCAATGCGCTCTAATCAGTAAATGG 25068 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGG 111904 ||||| ||||| || | | || | | ||||| |||| | || ||| | || Sbjct 25069 GCTGGGGGTATAGGCTTAAGTGTTCACAACATAAGAGC-AACATCTTCTTATATCCGTGG 25127 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 || ||||| | ||| ||||| || | || |||||| | ||||| || | ||||| || Sbjct 25128 AACCAATGGAAACTCAAATGGTCTTGTGCCTATGCTTAGAGTATTCAATGATACAGCTCG 25187 Query 111965 CTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 |||||| |||||| |||| | | || ||| | | || || ||||||||||| || Sbjct 25188 TTATGTAGACCAAGGTGGGGGGAAGAGAAAAGGAGCATTTGCTGTTTATCTTGAGCCTTG 25247 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| || || || | |||||| | | || |||||||| || | || || || Sbjct 25248 GCATGCTGACATTTTTGAGTTCTTAAAACTGAAACTCAACCATGGAAAAGAAGAACATCG 25307 Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 | | ||||| || | |||||||||||| || ||||| || ||||| |||||||| || Sbjct 25308 AGCCAGAGATCTTTTTTACGCTCTCTGGATCCCTGATCTTTTTATGAAAAGAGTTGAAGA 25367 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | || | ||| || | ||||| | ||| | | ||||| | |||| | Sbjct 25368 AAACGGAGACTGGAGCCTTATGTGTCCTAATCAATG-TCAAGGTCTTTGTGATGTATACG 25426 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | || || ||||| || ||||| ||||| |||||| || || || ||| | || | Sbjct 25427 GCGAAGAATTTGATGCTCTCTATACAAAATACGAGCAACAAGGTATGGCAAGGAAAACAG 25486 Query 112261 TGCCAGCTGCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | | || ||| | | | ||| ||| || | | |||| || ||||| |||| Sbjct 25487 T-CAAG--GCCCAAGCATTATGGTCAGCAATAATTGATAGCCAAATAGAAACTGGCACAC 25543 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | ||||||||||| ||||| | ||| | | ||||||||| ||| | || | Sbjct 25544 CTTATATGCTTTATAAAGATACTGCTAATAAGTATTCTAATCAAAAAAATCTAGGGACAA 25603 Query 112378 TCAA---GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 | || ||| ||| | || || |||||| | |||| ||| ||||||||| | | Sbjct 25604 TAAAATCAAGT---AACTTATGCACTGAAATCCTTGAATATACTAGCAAAGATGAAATTG 25660 Query 112435 CTGTGTGTAACCTCGCATC 112453 |||| || ||| | || || Sbjct 25661 CTGTATGCAACTTAGCCTC 25679 >seq149 Length=23196 Score = 100 bits (110), Expect = 4e-16 Identities = 414/638 (65%), Gaps = 15/638 (2%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || ||| | ||| ||||| | || | | || || ||| | |||| | || Sbjct 724 GAAAGGCCTCAGCATATGCTCATGAGAGTATCTGTAGGAATTCATTATGGAGATTTAGAG 665 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || |||||| |||| ||| || ||| | | || | |||| ||| || ||||||| Sbjct 664 TCAGTTTTGCAGACCTACAACCTTATGAGTCAGAAGTTT-TTCACCCATGCTTCACCAAC 606 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCT--TATTGCAAAC 111782 | | ||||| | || || || | || ||||| || || | || || | | Sbjct 605 CTTGTTCAATTCAGGGACTCCTTGCAATCAGATGTCTTCGTGCTTTTTAGTAATG-ATGC 547 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||| | || || || |||| ||||||| || || | | ||||| |||| || Sbjct 546 AAG-ATGACTCTATAGATGGTATTTACGAAACACTGAAGCAGTGTGCTTTAATCAGCAAA 488 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCG-TATTAG 111901 |||||||| ||||| || | | | || | | ||||| |||| | | ||| | Sbjct 487 TGGGCTGGAGGTATAGGCTTAAGCGTTCACAACATAAGAGC-AACATCTTCCTATATCCG 429 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| ||||| | ||| |||| | | || ||||| | || ||||| | ||||| Sbjct 428 TGGTACCAATGGAAACTCAAATGGCCTGGTACCTATGCTCAGAGTTTTTAATGATACAGC 369 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGCC 112018 || |||||| | |||| ||| | | || ||| | | || || ||||||||||| Sbjct 368 TCGTTATGTAGATCAAGGTGGAGGGAAAAGAAAAGGAGCATTTGCTGTTTATCTTGAGCC 309 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 ||||| || ||||| | || ||||| | | |||||||| || | || || | Sbjct 308 TTGGCATGCTGATATTTTTGAATTCCTAAAACTAAAGCTCAACCATGGGAAAGAAGA-AC 250 Query 112079 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 | || | || || || | ||| || |||||||| ||||| || ||||| ||||||| Sbjct 249 ATAGAGCTAGAGACCTTTTTTACGCCCTGTGGATTCCTGATCTTTTTATGAAAAGAGTTG 190 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATGCC 112196 | || | ||| | ||| ||| | ||||| | ||| || | ||||| |||| Sbjct 189 AAGAAAATGGAGACTGGAGTCTTATGTGTCCTAATCAATGC-CAAGGTCTAAGTGATGTA 131 Query 112197 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGA 112234 | ||||| || |||||||| ||||| | ||| || || Sbjct 130 TTCGGTGAAGAATTTGAAGCTCTCTATATAAAATATGA 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620722008612160