Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq521 132 6e-26 seq149 123 3e-23 seq2033 102 1e-16 seq1417 84.2 3e-11 >seq521 Length=94946 Score = 132 bits (146), Expect = 6e-26 Identities = 502/774 (65%), Gaps = 23/774 (3%) Strand=Plus/Minus Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 ||| | || | ||| | ||| || | ||||| |||| | | || |||||| || ||| Sbjct 25697 TATCTTGGTAAAGCTACAGAGGCTAAGTTGCATACAGCAATTTCATCTTTGCTAGTATAT 25638 Query 110335 TCCAAAATTTCCGTACACAAGTTG---GAACTCTTAATGACACCCAAGTTCTTCTGATTC 110391 || | ||||| || || ||||| || | ||| || | || | || || ||||| Sbjct 25637 TCAAGGATTTCAGTGCATAAGTTACTTGA--TTTTATTGTC-CCTAGATTTTTTTGATTA 25581 Query 110392 GATTTGGAGTT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 || | || ||| | ||| ||||| ||||| || || || |||||||| | || Sbjct 25580 GAATACTTATTAGCA-GTATCTTTATAAAGCATATAAGGTGTGCCAGTTTCTATTTGGCT 25522 Query 110451 CTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTC 110510 | | || || ||||| | ||| ||| ||| | || | ||||| | Sbjct 25521 ATCAATTATTGCTGACCATAATGCTTGGGCCTTGACTGTTTTCCTTGCCATACCTTGTTG 25462 Query 110511 CTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC 110570 |||||| || || || | | |||||||| | ||||| |||||| ||||||| || | Sbjct 25461 CTCGTATTTTGTATAGAGAGCATCAAATTCTTCGCCGTATACATCACAAAGACC-TTGAC 25403 Query 110571 CTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGT 110629 ||| | ||||| | ||| ||| | ||| || ||||| || ||||| || || | Sbjct 25402 ATTGATTAGGACACATAAGGCTCCAGTCTCCGTTTTCTTCAACTCTTTTCATAAAAAGAT 25343 Query 110630 CAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGA 110689 |||| ||||| | || | ||||| || | | ||| ||||| | || ||||||| Sbjct 25342 CAGGGATCCAGAGAGCGTAAAAAAGATCTCTGGCTCGATGTTCTTCTTTTCCATGGTTGA 25283 Query 110690 GGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGG 110749 | || | || || || | || || | ||||| || || ||||| ||||| | | Sbjct 25282 GTTTCAGTTTTAAGAACTCAAAAATGTCAGCATGCCAAGGCTCAAGATAAACAGCAAATG 25223 Query 110750 ATCCCTTACGA--CGACCCGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 ||| || | | ||| ||| ||| ||||| || ||||| ||||||| || || | Sbjct 25222 CTCCTTTTCTCTTCCCCCCACCTTGGTCTACATAACGAGCTGTATCATTGAATACTCTAA 25163 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865 ||||||| | || |||| || | ||||| || || | || | | | | ||| | Sbjct 25162 GCATAGGCACAAGACCATTTGAGTTTCCATTGGTTCCACGGATATAAGAAGATGTTG-CT 25104 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCT 110925 | |||| ||| | | | || ||||| || ||||| ||||| ||| | || || | Sbjct 25103 CTTATGTTGTGAACACTTAAGCCTATACCCCCAGCCCATTTACTGATTAGAGCGCATTGC 25044 Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATC----TGCCTTGTTGGCAATTAGAAAGCA 110981 | ||||| |||||||||| || || || || ||| | || ||| ||||| Sbjct 25043 TTTAGTGTTTCATAAATACCGTCTATTGAGTCATCTTGCATCATTAACAAG----AAGCA 24988 Query 110982 AGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 |||||||||||| | ||| || || | |||||| | || |||| ||||| Sbjct 24987 TGAAGACATCTGATTGCAAGGAGTCCCTGAATTGAATAAAGTTGGTGAAGCATG 24934 >seq149 Length=23196 Score = 123 bits (136), Expect = 3e-23 Identities = 407/624 (65%), Gaps = 19/624 (3%) Strand=Plus/Plus Query 110533 TCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGA 110591 |||||||| | ||| | |||||| ||||| || || ||| | ||||| | || Sbjct 114 TCAAATTCTTCACCGAATACATCACTTAGACC-TTGGCATTGATTAGGACACATAAGACT 172 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||| | |||| || ||||| || ||||| || || ||||||||||||| || | || Sbjct 173 CCAGTCTCCATTTTCTTCAACTCTTTTCATAAAAAGATCAGGAATCCACAGGGCGTAAAA 232 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 |||||| | | | ||||| | || |||||||| ||| | | || || | Sbjct 233 AAGGTCTCTAGCTCTATGTTCTTCTTTCCCATGGTTGAGCTTTAGTTTTAGGAATTCAAA 292 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC---GACGACCCGC 110768 ||||| | ||||| || || ||||| ||||| | | ||| || | | || | Sbjct 293 AATATCAGCATGCCAAGGCTCAAGATAAACAGCAAATGCTCCTTTTCTTTTCCCTCCACC 352 Query 110769 CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGA 110828 || | ||||| || ||||| |||| || || ||||||||||| | | |||| || Sbjct 353 TTGATCTACATAACGAGCTGTATCATTAAAAACTCTGAGCATAGGTACCAGGCCATTTGA 412 Query 110829 TTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATA-- 110886 | ||||| ||||| | || ||| | || | |||| ||| | || || Sbjct 413 GTTTCCATTGGTACCACGGATATAGGAAGATGTTGCTCTTATGTTGTG--AACGCTTAAG 470 Query 110887 CCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCA 110946 || ||||| || ||||| || || ||| ||||||| | ||||| | ||||||||| Sbjct 471 CCTATACCTCCAGCCCATTTGCTGATTAAAGCACACTGCTTCAGTGTTTCGTAAATACCA 530 Query 110947 TCAATCGAATC----TGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGG 111002 || || || || ||| | || | || |||||| |||||||||||| | ||| Sbjct 531 TCTATAGAGTCATCTTGCATCATT----ACTAAAAAGCACGAAGACATCTGATTGCAAGG 586 Query 111003 CGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGT 111061 || || | |||||| | || |||| ||||| |||| | || | || ||| || Sbjct 587 AGTCCCTGAATTGAACAAGGTTGGTGAAGCATGGGTGAA-AAACTTCTGACTCATAAGGT 645 Query 111062 TGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGA 111121 |||| || | | | || || |||| | ||||| || | | |||| ||||| Sbjct 646 TGTAGGTCTGCAAAACTGACTCTAAATCTCCATAATGAATTCCTACAGATACTCTCATGA 705 Query 111122 ACATATATTGAGGCGTTTCGATTA 111145 ||||| |||||| |||||| || Sbjct 706 GCATATGCTGAGGCCTTTCGACTA 729 >seq2033 Length=51049 Score = 102 bits (112), Expect = 1e-16 Identities = 305/462 (66%), Gaps = 8/462 (2%) Strand=Plus/Minus Query 119550 AGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAG 119609 ||||| ||||| ||| | ||| || | ||| |||||||| |||||||| |||||||| Sbjct 9203 AGTCCTGGCATAAGTGAACGTTTTTTCACCCAGAAGATGGCGCAAAAACTACCAGAAAAA 9144 Query 119610 AAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTC 119668 || || || || | | ||| | || | || | | ||||||| |||| || | Sbjct 9143 AAAATTCCTTCTATAATAGCGTATGCAACAAGCCTTTGAGCAAAACTGTCGCTG-TTATT 9085 Query 119669 GAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGC-TT 119727 | ||| || | |||||||| || || | || | || | | || | || Sbjct 9084 TACCCATTTCAAAGCCCAGTCAGCTTTCTTTTTAATTGATGGAAGGTGTATTATATCATT 9025 Query 119728 CGAAAAGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGG 119787 | | || || || ||||| | |||| ||||||| | || || || | || || | Sbjct 9024 CAATAACATGGTT-TTTTCTTGAGCATCAGTAATATAAGTGTCGATAAGCATGGAATAAG 8966 Query 119788 TCTCACCATGAACCATTTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 | ||| ||||| |||| || | |||| | ||||||| | ||||| || | || Sbjct 8965 CCCCACTATGAATATTTTCTATGACTATCTGAAATCCATAAAAAGCTCGAGCCTCAGGAA 8906 Query 119848 TTTGCACTTCGTCAGCAAAATTGTTGTTG--ATATTTTCAAAAACAATTCCATCGGATCC 119905 |||| ||||| || |||||| | || | | ||| || || ||||| | ||| || | Sbjct 8905 TTTGAACTTCA-CAAAAAAATT-TAGTAGCAAGATTCTCTAATACAATCCTATCAGAAGC 8848 Query 119906 AGCGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCA 119965 || || || ||||| || | ||| ||||| | | ||| ||||| | || ||| ||| Sbjct 8847 GGCAAAAAAAGCTAAAATATTCTTAATGAAATATTTTTCGTTATCAGTAAGATTTTCCCA 8788 Query 119966 GTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 || | || |||| ||||||||||| | |||||| ||||| Sbjct 8787 ATCTTGCAAGTCTTGAGACAAGTCCAATTTTTCAGCAGTCCA 8746 >seq1417 Length=75703 Score = 84.2 bits (92), Expect = 3e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 119824 CATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAAAT-TGTTGTTGATATTT 119882 ||||||||| |||||||| | ||||| ||||| ||| ||||| | || | |||| Sbjct 14267 CATAAAATGCTCGAGCTTCAGGGATTTGAACTTCA-CAGAAAAATCTACTGGCAAGATTT 14325 Query 119883 TCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGTACTTTATGAATTTCTGT 119942 || || ||||||||||| || | || || || ||||| | || ||||| || | | | Sbjct 14326 TCTAAGACAATTCCATCAGAAGCTGCAAAAAAAGCTAAAACATATTTTATAAAATGCCTT 14385 Query 119943 TCATTATCGTTGAGTGTTTTCCAGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCT 120002 |||| ||| | | ||||| ||| || | ||||| || ||| || | |||||| | Sbjct 14386 TCATCATCAGTCAATGTTTCCCAATCTCTTAGATCTTGAGCCAAATCAAGCTCTTCTGAA 14445 Query 120003 GTCCA 120007 ||||| Sbjct 14446 GTCCA 14450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588956652138400