Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq521 134 2e-26 seq149 132 6e-26 seq2491 84.2 3e-11 >seq521 Length=94946 Score = 134 bits (148), Expect = 2e-26 Identities = 304/454 (67%), Gaps = 5/454 (1%) Strand=Plus/Minus Query 106687 CTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGC 106746 |||||| ||||| ||||| || ||||| || || || | || | |||||| | | Sbjct 25461 CTCGTATTTTGTATAGAGAGCATCAAATTCTTCGCCGTATACATCACAAAGACCTTGA-C 25403 Query 106747 CTTGTCT-GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGT 106805 ||| | ||||| | ||| ||| | || || ||||| | ||||| ||||| | Sbjct 25402 ATTGATTAGGACACATAAGGCTCCAGTCTCCGTTTTCTTCAACTCTTTTCATAAAAAGAT 25343 Query 106806 CTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGA 106865 | || ||||| || | |||| |||||||| ||| ||||| | || ||||||| Sbjct 25342 CAGGGATCCAGAGAGCGTAAAAAAGATCTCTGGCTCGATGTTCTTCTTTTCCATGGTTGA 25283 Query 106866 GTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925 || | | | |||||| | || || || ||||| ||||||||||| || || | | Sbjct 25282 GTTTCAGTTTTAAGAACTCAAAAATGTCAGCATGCCAAGGCTCAAGATAAACAGCAAATG 25223 Query 106926 ATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAA 106982 ||| |||| | |||| |||| | |||||| || ||||| | || ||||| | || Sbjct 25222 CTCCTTTTCTCTTCCCCCCACCTTGGTCTACATAACGAGCTGTATCATTGAATACTCTAA 25163 Query 106983 GCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTC 107042 |||| || | || ||||| ||| | ||||| || || || ||| ||| | |||| Sbjct 25162 GCATAGGCACAAGACCATTTGAGTTTCCATTGGTTCCACGGATATAAGAAGATGTTGCTC 25103 Query 107043 TCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCG 107102 | | | || | | || |||||||||||||| || |||| | || || | | Sbjct 25102 TTATGTTGTGAACACTTAAGCCTATACCCCCAGCCCATTTACTGATTAGAGCGCATTGCT 25043 Query 107103 TAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136 | || ||| |||| ||||||| |||||||| || Sbjct 25042 TTAGTGTTTCATAAATACCGTCTATTGAGTCATC 25009 >seq149 Length=23196 Score = 132 bits (146), Expect = 6e-26 Identities = 303/453 (67%), Gaps = 5/453 (1%) Strand=Plus/Plus Query 106688 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 106747 || || ||| | ||||| |||||||| || ||||| | | || |||||| | || Sbjct 93 TCATATTTTATATAGAGAGCTTCAAATTCTTCACCGAATACATCACTTAGACCTTG-GCA 151 Query 106748 TTGTCT-GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTC 106806 ||| | ||||| | |||| ||| | ||| || ||||| | ||||| ||||| || Sbjct 152 TTGATTAGGACACATAAGACTCCAGTCTCCATTTTCTTCAACTCTTTTCATAAAAAGATC 211 Query 106807 TGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG 106866 ||||||||||||| |||| || |||||| | | ||||| | || |||||||| Sbjct 212 AGGAATCCACAGGGCGTAAAAAAGGTCTCTAGCTCTATGTTCTTCTTTCCCATGGTTGAG 271 Query 106867 TCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGA 106926 || | ||||| || | ||||| || ||||| ||||||||||| || || | | Sbjct 272 CTTTAGTTTTAGGAATTCAAAAATATCAGCATGCCAAGGCTCAAGATAAACAGCAAATGC 331 Query 106927 TCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||| |||| | ||| |||||| |||||| || ||||| | ||||| || | || Sbjct 332 TCCTTTTCTTTTCCCTCCACCTTGATCTACATAACGAGCTGTATCATTAAAAACTCTGAG 391 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 107043 ||| || | | |||| ||| | ||||| || || || ||| || | ||||| Sbjct 392 CATAGGTACCAGGCCATTTGAGTTTCCATTGGTACCACGGATATAGGAAGATGTTGCTCT 451 Query 107044 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103 | | || | | | || ||||| |||||||| || |||| ||||||| | | Sbjct 452 TATGTTGTGAACGCTTAAGCCTATACCTCCAGCCCATTTGCTGATTAAAGCACACTGCTT 511 Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136 || ||| | || ||||| | || ||||| || Sbjct 512 CAGTGTTTCGTAAATACCATCTATAGAGTCATC 544 >seq2491 Length=30888 Score = 84.2 bits (92), Expect = 3e-11 Identities = 246/370 (66%), Gaps = 8/370 (2%) Strand=Plus/Minus Query 106273 AAATACA-TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT 106331 ||| ||| || || | |||||| | ||| | |||||||||||| |||| | ||| || | Sbjct 4539 AAAGACAGTCAGCAAAACCTTGGATACCAATACCAATAGGTCTATGTCTTAAATTTGAAT 4480 Query 106332 TTCGCGCAGTC-TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 106390 ||| || || || || ||| |||||||| |||| | || ||||| | || Sbjct 4479 TTC-TACATTCAGGTACTGGGTAATGGTTTCTGTCTATGATTTTATTAAGATTATAAGTG 4421 Query 106391 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 106450 || ||||| | ||| | ||||||| ||||||| || || || |||||| Sbjct 4420 ACTTGTTTTGTCACTTCGAATAATTTTTCAAAATCAAAGGT--TTTTCGGTT-TTTGACA 4364 Query 106451 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 106510 ||| | | || |||||||| | |||||||| || | ||||| || |||||| Sbjct 4363 TACATGTTTAAAGCAATTGATGCTAGGTTGCAAACTGCGATTTCATCTTTGCTTGTGTAT 4304 Query 106511 TCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 106570 || | ||||| ||||| | || || || |||||||| | || |||||||| Sbjct 4303 TCACAGATTTCAGTACAGAGATTTGAGGATTTTATCGTCCCTAGGTTTTTTTGGTTTGAA 4244 Query 106571 TTTTTGTTGCAC-GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT 106629 |||| ||| || ||||| ||||| || || || || ||||| || ||||| | Sbjct 4243 AACCTGTT-CACATGGTCTTTGTATAGCATATAAGGAGTTCCAGTCTCAGTTTGTGATTC 4185 Query 106630 GAGAATTGCC 106639 | ||| ||| Sbjct 4184 AACAATCGCC 4175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589961419130720