Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq2617 116 5e-21 seq1825 87.8 2e-12 >seq2617 Length=108820 Score = 116 bits (128), Expect = 5e-21 Identities = 152/203 (75%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 126943 AAATTTTTATAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGC 127002 ||||||| |||| || || || ||||| | ||||||||||||||| | |||||||| | Sbjct 21154 AAATTTTCTTAGGACCGACTTATTATCAAAGACTTAAACATATGGTTGATGATAAAATTC 21095 Query 127003 ATGCTAGAAGTCATGGTCAAGTAACAAC-ATTACATCGTCAACCAAACTG-TGGTCGTTC 127060 || ||||| || |||||| || ||| ||||| | ||||| ||||| ||| | || Sbjct 21094 ATTCTAGAGCTCGTGGTCAGGTTCAAACTCTTACA-AGGCAACC-AACTGAAGGTAGGTC 21037 Query 127061 CCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTAT--TTTGGTTCATGGA 127118 ||| |||||||||||||||||||| || |||| |||||||| ||| | |||||| Sbjct 21036 AAGAGGAGGTGGATTAAGATTTGGAGAGATAGAAAGGGATTGTATGATTTCG--CATGGA 20979 Query 127119 GCCACACAATTTTTAAATGAAAG 127141 | | |||||||| ||||| Sbjct 20978 TCTGCTAGGTTTTTAAAAGAAAG 20956 >seq1825 Length=61595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 126602 AATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTATG 126660 |||||| || ||||| ||||| || |||| | |||| | |||| ||| ||| Sbjct 30453 AATTGGGGATAAATTCAGTTCTAGACATGGACAAAAAGGTGTTTTGTC-TATACTTTGGC 30395 Query 126661 CACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAATTAATCCAA 126720 |||||||||||||||| |||||| || |||||| || || |||||||| || || ||| Sbjct 30394 CACAAGAAGATATGCCTTTTACAGAACAAGGTATAACTCCTGATATTATTATAAACCCAC 30335 Query 126721 ATTGTATACCGTCAAGAATGACCAT 126745 || | | || ||||||||||| || Sbjct 30334 ATGCTTTTCCTTCAAGAATGACAAT 30310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658381571454880