Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1417 358 8e-94 seq2384 297 2e-75 seq2033 196 6e-45 >seq1417 Length=75703 Score = 358 bits (396), Expect = 8e-94 Identities = 623/896 (70%), Gaps = 15/896 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||| ||||| || | |||| |||| || ||||| ||||| || | Sbjct 13632 CATAACCCCAGTTTTCTGATAATCACTCACTCTCTTTTCAAAGAAATTCGTCTTACCCTG 13691 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 | || || | ||||| | ||||| ||||| | |||||||| | |||| Sbjct 13692 CATAGAAATCATCTCCATCCACTCAAAAGGATTTGCCACTTTATATATTTTCTCACATCC 13751 Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051 ||| | | || | |||||||||| |||||| | |||| | |||| || | || Sbjct 13752 TAAAGCAATAAGTAATCTATCCGCAATAAATTCAAGATATTGAGACATAAGCCTTGAATT 13811 Query 37052 TATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGC 37111 || ||||| | || ||||| | || || || ||| || ||| ||||| | ||| Sbjct 13812 CATTCCAATCAATTCAACTGGTAAAGCTTCAGTAATAAACTCTTCTTCAATTATAATAGC 13871 Query 37112 ATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATT--TAAAC 37169 || || |||| ||||||||||| || | | |||| ||| | || | Sbjct 13872 TTCACGAATCATATCTTGAATAACTTCTT--GTGGTAGCTTATTAACAATGTGAGTATAT 13929 Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 || ||||| |||||||| ||||||||||||||||||||| || | |||||||||||| Sbjct 13930 AACAAACAAGCAAAATCTGTATGTAAACCTTCATCTCTACTGATAAGTTCATTAGAAAAT 13989 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCC-AGA 37288 || | || ||||| | | |||||| | ||| || || | |||||| ||| ||| Sbjct 13990 GTGAGACCAGGCATAAGTGAACGTTTTTTCAGCCAGAAAATCGAA-CAAAAGCTCCCAGA 14048 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348 ||||||||||||||||||||| ||| |||||||||| | | | ||| || ||| Sbjct 14049 AAAGAAAATACCTTCAACTGCAGCATATGCTACAAGTCTTTGGGCAAAACATGCACTGCT 14108 Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAA--TTGTTTCA 37406 |||| |||||||| | |||||| || ||| ||||| |||||| |||||| Sbjct 14109 ATCA---ATCCATTTCAAAGCCCAATCAGCTTTTTTTTTAATCGATTCAAAGTTGTTT-- 14163 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 ||||| || | | | ||||||||||| | |||| ||||||| || || |||| | | Sbjct 14164 ATTGCATTAAGTAATATGTTTTTTTCTTGAGGATCTTTTATATACGTGTCGATTAACATA 14223 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 ||| | ||| ||| || ||||| ||||| || ||||| |||||||| | |||| Sbjct 14224 GAATAAGTCTCACTGTGTATGTTTTCCATAGCAATTTGAAATCCATAAAATGCTCGAGCT 14283 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| | |||||| || ||||| || | || | ||||| || || |||||| Sbjct 14284 TCAGGGATTTGAACTTCACAGAAAAATCTACTGGCAAGATTTTCTAAGACAATTCCATCA 14343 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTT 37646 ||||||||| ||||| | |||||||||||||||||| |||||||||| | ||| || Sbjct 14344 GAAGCTGCAAAAAAAGCTAAAACATATTTTATAAAATGCCTTTCATCATCAGTCAATGTT 14403 Query 37647 TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC-CAA 37705 | |||||| | | ||||| | ||||||| || || |||||||||||||| | Sbjct 14404 TCCCAATCTCTTAGATCTTGAGCCAAATCAAGCTCTTCTGAAGTCCAAAAACTTGCTTCA 14463 Query 37706 TGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC 37761 ||| ||| ||||| ||||| ||||| || | |||||| || || || || |||| Sbjct 14464 TGC-TTTTTGTACATAGTCCAGATATCGTTGTATTGTATCGGGAACATGACGAATC 14518 >seq2384 Length=116048 Score = 297 bits (328), Expect = 2e-75 Identities = 624/914 (68%), Gaps = 25/914 (3%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||||||||| |||||||||| || | || ||| |||| ||||| |||||||| |||| Sbjct 41562 CATAACTCCTGTTTTTTGATACTCACTCACACGTTTTTCAAAAAAGTTTGTCTTACCTTG 41621 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 | |||||| | ||||| | ||||| ||||| || |||| || ||| Sbjct 41622 CATTGATATCATCTCCATCCATTCAAAAGGATTTAATACGCGGTATAATTTATCACAACC 41681 Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051 || | | ||| ||||| |||||||| || | |||| | |||| || |||| Sbjct 41682 CAAAGCAACTAAAAGTCTATCAGCAACAAACTCAAGATATTGAGACATAAGCCTTGAGTT 41741 Query 37052 TATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGC 37111 |||||||| |||| |||||||| || ||| | |||| ||| || ||| | ||| Sbjct 41742 CATACCAATAAGTTCTACTGGAAGAGCTTCTGTTATAAATTCTTTCTCAATTTCAATAGC 41801 Query 37112 ATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATT-TTAA--ATATTTAA- 37167 || || || | | || || || ||| | | || |||| |||| | | Sbjct 41802 TTCACGAATAATTTCATAGAT---TTGATC--TTGTGAAAGCTTATTAACTATATGTGAG 41856 Query 37168 -ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 | | |||||| |||||||| ||| | ||||||||||| |||||||| |||||| ||| Sbjct 41857 TATAGTAAACAAGCAAAATCTGTATGAAGACCTTCATCTCGACTTATCAGTTCATTGGAA 41916 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCC- 37285 || || | |||||||| | | | |||||| ||||| |||||||| |||||| ||| Sbjct 41917 AATGTGAGCCCTGGCATAAGAGAACGTTTTTTCATCCAGAATATTGC-GCAAAAACTCCC 41975 Query 37286 AGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACT 37345 |||||||||||| ||||| | || || |||| || || | | | |||| | | | Sbjct 41976 AGAAAAGAAAATCCCTTCTATAGCAGCGTATGCAACGAGTCTTTGGGC-AAAGCT-ATCG 42033 Query 37346 ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT-TGTTT 37404 | | | |||||||| | ||| ||||| || ||||| || || ||| | Sbjct 42034 CTGCT-ATTTATCCATTTCAAAGCCCAGTCTGCTTTCTTTTTAATTGATGGAAAGTGTGT 42092 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 | | || || || | | ||||||||| | || || ||||| || || || || | Sbjct 42093 GA-TAGCATTGAATAACATACTTTTTTCTTGAACATTAGTGATATATGTGTCGATAAGCA 42151 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| ||||| |||| |||||| || ||||||||||| ||||||||| | || Sbjct 42152 TCGAATAAGTTTCACTATGAACATTTTCCATGGCTATCTGAAATCCATAAAAAGCTCGAG 42211 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 | |||| | |||||| || ||| ||| | |||| | || || || ||||||| Sbjct 42212 CCTCAGGAATTTGAACTTCACAAAAGAACTTAGTAGCAAGATTCTCCAATACAATCCCAT 42271 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATT 37644 || ||| ||||| ||||| | ||||| || ||||| |||||||||| || | | || Sbjct 42272 CAGAAGCAGCAAAAAAAGCTAAGACATACTTAATAAAGTGTCTTTCATTATCAGTAAGTT 42331 Query 37645 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCA 37704 ||| ||||||| | |||| | || || | || ||| | ||||||||||| || Sbjct 42332 TTTCCCAATCACGTAAGTCTTGAGCCAAGTCCAACTCTTCAGCAGTCCAAAAACTAGC-- 42389 Query 37705 ATGCACGT---TTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC 37761 | || || |||||||| |||||||||||| ||| |||||||||||| || ||||||| Sbjct 42390 -TTCATGTTTCTTATACATAGTCCAAATATCACTATATTGTATTGGAAACATGACAAATC 42448 Query 37762 TATCAGATGATTCT 37775 | | || |||||| Sbjct 42449 TGTTAG--GATTCT 42460 >seq2033 Length=51049 Score = 196 bits (216), Expect = 6e-45 Identities = 591/899 (66%), Gaps = 19/899 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||||||||| |||| ||| | || || || |||| | ||| |||||||| || Sbjct 9564 CATAACTCCTGTTTTCTGACACTCATTCACACGATTTTCAATAAAGTTTGTCTTGTATTG 9505 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 || || ||| | ||||| | ||||| ||||| ||| | |||| || | | Sbjct 9504 TATTGGTATTATCTCCATCCATTCAAAAGGATTTAATGCACGGTATAATTTATCATAGCC 9445 Query 36992 TAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTT 37051 ||| | | | ||||||||| | || ||| || | ||||| | |||| ||| |||| Sbjct 9444 TAAAGCTATTAAAAGCCTATCAGAAATAAACTCAAGGTATTGAGACATAAGTCTTGAGTT 9385 Query 37052 TATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGC 37111 |||||||| | || ||||||| | ||| || |||| ||||| ||| || ||| Sbjct 9384 CATACCAATAATTTCAACTGGAAGAGTTTCTATAATAAATTCCTTTTCAATTTCTATAGC 9325 Query 37112 ATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGA---TATTT--TAAATATTTA 37166 || || || ||| || | | || || ||| | | |||| || || | | Sbjct 9324 TTCACAAATTA-ATT--CATTGATTTGATC--TTGTGAAAGCTTATTGACTAGATGTGAA 9270 Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 | |||||||| | |||||| ||| |||| || ||||||||||| | || ||| ||| Sbjct 9269 TATAATAAACAAGAAAAATCTGTATGAAAACTTTTGTCTCTACTTATGAGTTTATTTGAA 9210 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CC 37285 | || | ||||||||| | | |||||| | ||| || || || |||||| | || Sbjct 9209 GATGTGAGTCCTGGCATAAGTGAACGTTTTTTCACCCAGAAGATGGC-GCAAAAACTACC 9151 Query 37286 AGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACT 37345 |||||| ||||| ||||| | || |||| ||||| | | | | ||| | || Sbjct 9150 AGAAAAAAAAATTCCTTCTATAATAGCGTATGCAACAAGCCTTTGAGCAAAACTGTCGCT 9091 Query 37346 ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT-TGTTT 37404 | || | |||||| | ||| || || || ||||| || || ||| | Sbjct 9090 GTTATTT---ACCCATTTCAAAGCCCAGTCAGCTTTCTTTTTAATTGATGGAAGGTGTAT 9034 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 | | | || || | | | ||||||||| | ||| || |||||||| || || || | Sbjct 9033 TATAT-CATTCAATAACATGGTTTTTTCTTGAGCATCAGTAATATAAGTGTCGATAAGCA 8975 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || ||||||||||| || |||||||||| ||||||||| | || Sbjct 8974 TGGAATAAGCCCCACTATGAATATTTTCTATGACTATCTGAAATCCATAAAAAGCTCGAG 8915 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 | |||| | |||||| || |||||| | |||| | || || || |||| || Sbjct 8914 CCTCAGGAATTTGAACTTCACAAAAAAATTTAGTAGCAAGATTCTCTAATACAATCCTAT 8855 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATT 37644 || ||| ||||| ||||| | || || || || |||| | |||| | || | | | Sbjct 8854 CAGAAGCGGCAAAAAAAGCTAAAATATTCTTAATGAAATATTTTTCGTTATCAGTAAGAT 8795 Query 37645 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC-C 37703 ||| |||||| | | |||| || || || | || ||| | ||||||||||| || Sbjct 8794 TTTCCCAATCTTGCAAGTCTTGAGACAAGTCCAATTTTTCAGCAGTCCAAAAACTAGCTT 8735 Query 37704 AATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATCT 37762 |||| |||||||| ||||| |||||| ||| |||| | ||||| || |||||||| Sbjct 8734 CATGC-TTCTTATACATAGTCCATATATCACTATATTGTTTGGGAAACATGACAAATCT 8677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592297342393120