Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1981 143 3e-29 seq2491 116 4e-21 seq521 111 2e-19 seq149 111 2e-19 >seq1981 Length=53738 Score = 143 bits (158), Expect = 3e-29 Identities = 481/740 (65%), Gaps = 18/740 (2%) Strand=Plus/Plus Query 75503 GGGACAAATGGTCAATCAGATGGTATTA-TTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 ||||||||||| ||| |||| |||| |||| ||| | | || ||||| | ||||| Sbjct 25528 GGGACAAATGGAACTTCAAATGG-ATTAGTTCCTATGTTAAGAGTTTTTAATGATACAGC 25586 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 | |||||| |||||| ||| | | || || | | || || || || || || Sbjct 25587 TAGATATGTAGATCAAGGTGGGGGGAAAAGAAAAGGAGCTTTTGCAGTATATTTAGAGCC 25646 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||||||| ||||| | || || || | | | || ||| | || || Sbjct 25647 ATGGCATGCGGATATATTTGAATTTCTAATGCTTAAAAGGAATATTGGTAAAGAGGAACA 25706 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || ||||||||| |||| ||| ||| ||||||| | || ||||| || ||||| Sbjct 25707 AAGGGCTAGAGATCTGTTTTTCGGCCTTTGGGTTCCAGATTTGTTTATGAAACGTGTTGA 25766 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 | |||| | ||| || | | ||||| | | || || || || || | Sbjct 25767 AAAAAATGGTGAGTGGACTTTGATGTGTCCTAATGATTGCCCTGGACTTTCTGATGTCTG 25826 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 ||| || || ||||| | || || ||| |||||| || ||||||| | ||| Sbjct 25827 GGGAGAAGAATTTGAGTCACTTTATGAAAAATATGAACGTGAAGGTAGAGGAAGAAGGAC 25886 Query 75859 TGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 ||| ||| | || | ||| ||| ||| | |||| ||||| ||||||||||| | Sbjct 25887 TGTTAAAGCA-CAGACACTATGGGCGGCGATTATTGAATCTCAGACTGAGACTGGAACTC 25945 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | |||||||| ||||| ||| | ||||| | || ||||| || || || |||| Sbjct 25946 CTTATATGCTATACAAAGATCATGTTAACAGGTTTTCAAATCAAAAAAACTTAGGGACAA 26005 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 | || || ||||| || || ||||| | || |||||| ||| ||||| | || | Sbjct 26006 TTAAATCATCTAATCTCTGTACTGAAATCTGTGAATACACAAGTAAAGATGAAATTGCAG 26065 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG---CACTT 76094 |||| || || |||||||| || | | |||||||| || ||| |||| Sbjct 26066 TTTGTAACTTAGCATCAATTGCTTTAAACATGTATGTCAGGGA------TCGTAAAACTT 26119 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 |||| | ||||||| | |||| | |||||| ||||| | ||||| || | ||| Sbjct 26120 TTGACTTTGAAAAATTATTTGAAGTAACAAAGCAAGTTACATACAATCTTAATAAAATCA 26179 Query 76155 TTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 | || |||||| ||| || || || || |||| || || | |||| || || Sbjct 26180 TAGATAGAAATCATTACCCTGTACCTGAATG-TAGAAATTCAAACTTAAGACATAGGCCG 26238 Query 76214 ATTGGTTTGGGTGTTCAAGG 76233 |||||| | ||| ||||||| Sbjct 26239 ATTGGTATTGGTATTCAAGG 26258 >seq2491 Length=30888 Score = 116 bits (128), Expect = 4e-21 Identities = 253/370 (68%), Gaps = 8/370 (2%) Strand=Plus/Plus Query 75883 GGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTG 75942 ||| ||| | ||||||| || ||||||||||| || |||||||| ||||| || | || Sbjct 4175 GGCGATTGTTGAATCACAAACTGAGACTGGAACTCCTTATATGCTATACAAAGA-CCATG 4233 Query 75943 T-AACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGG 76001 | |||| | |||||||| || | || || || || ||||||||| || || | Sbjct 4234 TGAACAGGTTTTCAAACCAAAAAAACCTAGGGACGATAAAATCCTCAAATCTCTGTACTG 4293 Query 76002 AAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCC 76061 |||| | || |||||| || ||||| | || |||||||| | |||||||| || Sbjct 4294 AAATCTGTGAATACACAAGCAAAGATGAAATCGCAGTTTGCAACCTAGCATCAATTGCTT 4353 Query 76062 TTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCA 76121 | | ||||||||| || || || ||||||| ||||||| | ||| | | Sbjct 4354 TAAACATGTATGTCAA-AAACCGA--AAAACCTTTGATTTTGAAAAATTATTCGAAGTGA 4410 Query 76122 CAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT-TGAG 76180 |||| || || | ||||| || | |||| |||||||| ||| || || | Sbjct 4411 CAAAACAAGTCACTTATAATCTTAATAAAATCATAGACAGAAACCATTACCCAGTACCTG 4470 Query 76181 ACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCG 76240 | || |||| || ||| | |||| |||||||||||| | ||| | |||||| | || Sbjct 4471 AATG-TAGAAATTCAAATTTAAGACATAGACCTATTGGTATTGGTATCCAAGGTTTTGCT 4529 Query 76241 GA-TGTATTT 76249 || ||| ||| Sbjct 4530 GACTGTCTTT 4539 >seq521 Length=94946 Score = 111 bits (122), Expect = 2e-19 Identities = 437/678 (64%), Gaps = 17/678 (3%) Strand=Plus/Plus Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || |||||||| ||||||| |||| ||| || | | | || || | |||| || ||| Sbjct 25009 GATGACTCAATAGACGGTATTTATGAAACACTAAAGCAATGCGCTCTAATCAGTAAATGG 25068 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||||||||||| || | | || | | ||||| | ||| ||| || || Sbjct 25069 GCTGGGGGTATAGGCTTAAGTGTTCACAACATAAGAGCAACATCTTCTTATATCCGTGGA 25128 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| | ||| ||||| || | || |||||| | ||||| || | ||||| || Sbjct 25129 ACCAATGGAAACTCAAATGGTCTTGTGCCTATGCTTAGAGTATTCAATGATACAGCTCGT 25188 Query 75566 TATGTAAATCAA---GCGGGGCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||||| | ||| | |||| | || || | | || || || | || || ||| Sbjct 25189 TATGTAGACCAAGGTGGGGGGAAGAGAAAAGGAGCATTTGCTGTTTATCTTGAGCCTTGG 25248 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| || || | |||||| | | | ||||||||| || | ||||| ||| Sbjct 25249 CATGCTGACATTTTTGAGTTCTTAAAACTGAAACTCAACCATGGAAAAGAAGAACATCGA 25308 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 |||||||| |||| | || ||||| || || ||||| ||||| | ||||| || Sbjct 25309 GCCAGAGATCTTTTTTACGCTCTCTGGATCCCTGATCTTTTTATGAAAAGAGTTGAAGAA 25368 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 || | ||| ||| | ||||| | ||| | | |||||| | || | || Sbjct 25369 AACGGAGACTGGAGCCTTATGTGTCCTAATCAATG-TCAAGGTCTTTGTGATGTATACGG 25427 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 || || ||||| || ||||| ||||| || || | | |||| || | || || Sbjct 25428 CGAAGAATTTGATGCTCTCTATACAAAATACGAGCAACAAGGTATGGCAAGGAAAACAGT 25487 Query 75862 ACCAGCCGCCGATG---TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 | || ||| | | | ||| || || | | || | || ||||| ||||| Sbjct 25488 -CAAG--GCCCAAGCATTATGGTCAGCAATAATTGATAGCCAAATAGAAACTGGCACACC 25544 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 ||||||||||| || ||| || ||| ||| | ||| ||||| ||| | || ||||| Sbjct 25545 TTATATGCTTTATAAAGATACTGCTAATAAGTATTCTAATCAAAAAAATCTAGGGACAAT 25604 Query 75979 CAAGAGCTCAA--ATCTT-TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 || |||| | ||| ||||| ||||| | || || || || ||||| | || Sbjct 25605 AAA---ATCAAGTAACTTATGCACTGAAATCCTTGAATATACTAGCAAAGATGAAATTGC 25661 Query 76036 TGTTTGCAATTTGGCATC 76053 ||| ||||| || || || Sbjct 25662 TGTATGCAACTTAGCCTC 25679 >seq149 Length=23196 Score = 111 bits (122), Expect = 2e-19 Identities = 299/454 (66%), Gaps = 5/454 (1%) Strand=Plus/Minus Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || ||||| || | ||||| || | ||| || | | ||||||| |||| || ||| Sbjct 544 GATGACTCTATAGATGGTATTTACGAAACACTGAAGCAGTGTGCTTTAATCAGCAAATGG 485 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||||| ||||| || | | | || | | ||||| | || ||| || || Sbjct 484 GCTGGAGGTATAGGCTTAAGCGTTCACAACATAAGAGCAACATCTTCCTATATCCGTGGT 425 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || ||||| | ||| |||| | | || ||||| | || ||||| | ||||| || Sbjct 424 ACCAATGGAAACTCAAATGGCCTGGTACCTATGCTCAGAGTTTTTAATGATACAGCTCGT 365 Query 75566 TATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||||| |||||| || | | || || | | || || || | || || ||| Sbjct 364 TATGTAGATCAAGGTGGAGGGAAAAGAAAAGGAGCATTTGCTGTTTATCTTGAGCCTTGG 305 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| ||||| | || ||||| | || |||||||| || | ||||| | | Sbjct 304 CATGCTGATATTTTTGAATTCCTAAAACTAAAGCTCAACCATGGGAAAGAAGAACATAGA 245 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 |||||| || |||| ||||||||||||| || ||||| ||||| | ||||| || Sbjct 244 GCTAGAGACCTTTTTTACGCCCTGTGGATTCCTGATCTTTTTATGAAAAGAGTTGAAGAA 185 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 ||| | ||| |||| | ||||| | ||| || | |||||| || | | || Sbjct 184 AATGGAGACTGGAGTCTTATGTGTCCTAATCAATGC-CAAGGTCTAAGTGATGTATTCGG 126 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 ||| || |||||||| ||||| | ||| |||||| Sbjct 125 TGAAGAATTTGAAGCTCTCTATATAAAATATGAA 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596550002688640