Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq2617 105 8e-18 seq2134 102 1e-16 seq1842 95.1 2e-14 >seq2617 Length=108820 Score = 105 bits (116), Expect = 8e-18 Identities = 161/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194565 TACTGGTaaaaaaaTTGAAAATAAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAA 194624 |||||| || | | ||||| ||||||| |||| || |||||||| || | ||||| Sbjct 21177 TACTGGGAATAGACTTGAAGCACAAATTTTCTTAGGACCGACTTATTATCAAAGACTTAA 21118 Query 194625 ACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTAACTACT-TTACATC 194683 ||| |||||| | |||||||| ||| ||||| || ||| || || ||| ||||| Sbjct 21117 ACATATGGTTGATGATAAAATTCATTCTAGAGCTCGTGGTCAGGTTCAAACTCTTACAAG 21058 Query 194684 GACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAG 194743 | ||||||| | ||| | || ||| || || |||||||||||||| || |||| | Sbjct 21057 G-CAACCAACTGAAGGTAGGTCAAGAGGAGGTGGATTAAGATTTGGAGAGATAGAAAGGG 20999 Query 194744 ACTGTAT--TTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAG 194786 | ||||| ||| | ||||| || || || ||||| ||||| Sbjct 20998 ATTGTATGATTTCG--CATGGATCTGCTAGGTTTTTAAAAGAAAG 20956 >seq2134 Length=45942 Score = 102 bits (112), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 194565 TACTGGTaaaaaaaTTGAAAATAAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAA 194624 |||||| || | | ||||| ||||||| |||| ||||||||||| || | ||||| Sbjct 29717 TACTGGGAATAGACTTGAAGCACAAATTTTCTTAGGACCAACTTATTATCAGAGACTTAA 29776 Query 194625 ACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTAACTACTTTACATCG 194684 || |||||| | ||||| || ||| ||||| || ||| ||||| || ||| | Sbjct 29777 GCATATGGTTGATGATAAGATTCATTCTAGAGCTCGTGGTCAAGTTCAAACATTAACAAG 29836 Query 194685 ACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGA 194744 |||||||| | ||| | || |||||| || | |||||||| |||||||||| || Sbjct 29837 ACAACCAACTGAAGGTAGATCAAGAGGTGGTGGGCTTAGATTTGGTGAAATGGAAAGGGA 29896 Query 194745 CTGTAT 194750 ||||| Sbjct 29897 TTGTAT 29902 >seq1842 Length=60065 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||||| |||||| |||||| ||| || || | || |||||| || || ||||| Sbjct 51818 AAGAACTCTTATGGTTTATTAGAGGAAGCACAAATGCTAATGAATTAAGTGCTAAAGGTG 51877 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 | | | ||| ||| ||||| | | || || |||||| | ||| |||| ||| | Sbjct 51878 TCCATATCTGGGATGCAAATGGAAGTAGGGATTTCTTAGATAAACTCGGCTTTAATGATA 51937 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||| || ||| |||| ||| |||| || || |||||||||||| || ||| ||| Sbjct 51938 GAGAAGTTGGAGATCTAGGGCCAGTTTACGGTTTCCAATGGAGACATTTTGGAGCTGAAT 51997 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGGAGTGGACCA 172621 ||| | | | || || | || || ||| |||||||| || || Sbjct 51998 ATA-CTAATATGAATGCTGACTATACAAACCAAGGAGTTGATCA 52040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632468822716640