Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq2617 113 6e-20 seq1825 87.8 2e-12 >seq2617 Length=108820 Score = 113 bits (124), Expect = 6e-20 Identities = 127/165 (77%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 201919 AAATTTTTATAGGCCCAACATACTATCATCGTCTTAAACATATGGTTAAGGATAAAATGC 201978 ||||||| |||| || || || ||||| | ||||||||||||||| | |||||||| | Sbjct 21154 AAATTTTCTTAGGACCGACTTATTATCAAAGACTTAAACATATGGTTGATGATAAAATTC 21095 Query 201979 ATGCGAGAAGTCATGGTCAAGTAACAAC-ATTACATCGTCAACCAAACTG-TGGTCGGTC 202036 || | ||| || |||||| || ||| ||||| | ||||| ||||| ||| |||| Sbjct 21094 ATTCTAGAGCTCGTGGTCAGGTTCAAACTCTTACA-AGGCAACC-AACTGAAGGTAGGTC 21037 Query 202037 CCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTAT 202081 ||| |||||||||||||||||||| || |||| |||||||| Sbjct 21036 AAGAGGAGGTGGATTAAGATTTGGAGAGATAGAAAGGGATTGTAT 20992 >seq1825 Length=61595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 201578 AATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTATG 201636 |||||| |||||||| ||||| || |||| | |||| | |||| ||| ||| Sbjct 30453 AATTGGGGATAAATTCAGTTCTAGACATGGACAAAAAGGTGTTTTGTC-TATACTTTGGC 30395 Query 201637 CACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTATAATCAATCCAA 201696 |||||||||||||||| |||||| || ||||| || || |||||||| || || ||| Sbjct 30394 CACAAGAAGATATGCCTTTTACAGAACAAGGTATAACTCCTGATATTATTATAAACCCAC 30335 Query 201697 ATTGTATACCATCAAGAATGACCAT 201721 || | | || ||||||||||| || Sbjct 30334 ATGCTTTTCCTTCAAGAATGACAAT 30310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655258474052000