Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2191 105 4e-18 seq1753 96.9 2e-15 seq1260 95.1 8e-15 seq1993 93.3 3e-14 seq2459 82.4 5e-11 seq2223 82.4 5e-11 seq156 82.4 5e-11 >seq2191 Length=126925 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||||||| || |||||| || ||||| || || | Sbjct 117870 ACCACCTCTCAATCTTAACACCAAATGTAGTGTTGACTCTTTCTGGATGTTATAGTCTGC 117811 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| | | || || ||||| || || |||||||| | | ||||||||| | || Sbjct 117810 AAGTGTTCTCCCATCTTCTAATTGCTTGCCTGCAAAAATAAGTCTCTGCTGATCAGGGGG 117751 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| || | ||||| || | | || || || | Sbjct 117750 AATTCCTTCTTTATCTTGAATTTT-TGCCTTAACATTTTCAATACTATCTGAAGACTCTA 117692 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||| ||||| | || || |||||||| |||||| Sbjct 117691 CATCTAGAGTTATTGTTTTGCCTGTAAGAGTCTTAACAAAGATTTGCATA 117642 >seq1753 Length=65450 Score = 96.9 bits (106), Expect = 2e-15 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||| | | | |||||||||| || ||||||||| ||| Sbjct 9683 AAAATCTGCATCCCACCTCTGAGTCTAAGAACCAAATGTAATGTTGACTCTTTTTGGATG 9624 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| | | || | | || |||||||||||||| || || || | | || Sbjct 9623 TTATAATCAGCCAAAGTCCTACCATCTTCCAATTGTTTTCCAGCGAAGATAAGCCTTTGT 9564 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | ||||||||| || |||||| | || |||| || | |||| Sbjct 9563 TGGTCTGGGGGAATACCTTCTTTATCTTGAATTTT-GGCTTTGACATTTTCAATACTGTC 9505 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || ||||||| || || ||||| ||||| | ||||| |||||||||||||| Sbjct 9504 TGAAGACTCGACGTCAAGTGTTATAGTTTTTCCTGTAAGGGTTTTGACAAAGATCTGCAT 9445 Query 33750 A 33750 | Sbjct 9444 A 9444 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||||||| | | || ||||| | ||| ||| ||||| ||||||||||| | Sbjct 10128 ACCTCCTCTCAACCTAAGAACTAAATGCAAAGTTGACTCCTTTTGAATGTTGTAATCAGC 10069 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || || | ||||||||| ||||| || | | || ||||| | || Sbjct 10068 CAAAGTTCTTCCATCCTCAAGTTGTTTTCCTGCAAAGATAAGTCTTTGTTGATCAGGGGG 10009 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||||| | || |||| || | | || || || | Sbjct 10008 GATACCTTCTTTATCTTGGATTTT-AGCTTTGACATTTTCAATACTATCAGAAGACTCAA 9950 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| ||||| || || || ||||| |||||||| |||||| Sbjct 9949 CATCAAGTGTGATAGTTTTTCCAGTCAAAGTTTTAACAAAGATTTGCATA 9900 >seq1260 Length=79673 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| | | ||| |||||||| || |||||||| ||||| ||||| | Sbjct 62409 CCACCTCTCAGTCTCAGCACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAATCAGCA 62468 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || ||||| || || |||||||| | | |||||||| | || Sbjct 62469 AGTGTTCTCCCATCTTCTAATTGCTTGCCTGCAAAAATAAGTCTTTGCTGATCAGGAGGG 62528 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| |||||| |||| |||| || | |||| ||||| || Sbjct 62529 ATGCCTTCTTTGTCTTGTATTTTCGCTTTC-ACATTTTCAATACTGTCTGACGATTCTAC 62587 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || ||||| || ||||| || || || || || |||||| Sbjct 62588 ATCTAAAGTTATAGTTTTCCCAGTTAAAGTCTTGACGAATATTTGCATA 62636 >seq1993 Length=52953 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | || |||||||| || || ||||||||| ||||| ||||| | Sbjct 24767 CCACCTCTCAATCTTAGAACCAAATGAAGTGTTGACTCTTTTTGAATGTTATAATCAGCC 24708 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | | || || || ||||| || |||||||| | | ||| ||||| | || Sbjct 24707 AAAGTCCTACCATCTTCTAACTGTTTACCAGCAAAAATAAGTCTCTGTTGATCAGGAGGG 24648 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||||| || ||||||| | || ||||| || | | || ||||| || Sbjct 24647 ATTCCTTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATACTATCAGAAGATTCAAC 24589 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || || || || || ||||| |||||||| Sbjct 24588 ATCCAAAGTAATAGTTTTTCCAGTCAATGTCTTGACAAAAATCTGCAT 24541 >seq2459 Length=32074 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| |||||||| ||||| |||||||| |||||||| || | Sbjct 25512 CACCACCTCTTAATCTTAAGACCAAATGGAGAGTCGATTCTTTTTGAATGTTGTAGTCAG 25571 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || | | | || || | || ||||| ||||| || | ||||||||||| | | Sbjct 25572 CTAAGGTTCTTCCATCTTCAAGCTGCTTTCCTGCAAAGATTAGGCGCTGCTGATCAGGAG 25631 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||| || ||||| || || || | || | | || || || Sbjct 25632 GAATTCCTTCTTTATCTTGGATTTT-TGCTTTTACGTTCTCAATTGAATCAGAAGACTCT 25690 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || || | || ||||| || ||||| | || || ||||| || |||||| || Sbjct 25691 ACATCTAAAGTTATCGTCTTTCCTGTGAGTGTCTTAACAAAAATTTGCATATTT 25744 >seq2223 Length=42303 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||||||||| |||||||| || | | || | | | || || | |||||| || || || Sbjct 22118 CTCTTTTTGAATGTTGTAGTCAGCCAAGGTTCTTCCATCTTCTAGTTGTTTGCCAGCGAA 22177 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | | || |||||| | || | ||||||||| || ||||| ||| ||| | Sbjct 22178 GATAAGCCTTTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTTGGCTTT-AACGT 22236 Query 33678 AGTCACGG-TGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||| ||||| ||||||| || || ||||| ||||| | ||||| | Sbjct 22237 TTTCAATGCTGTCTGAGGATTCAACGTCAAGTGTTATGGTTTTTCCTGTGAGGGTTTTGA 22296 Query 33737 CAAAGATCTGCATA 33750 | |||||||||||| Sbjct 22297 CGAAGATCTGCATA 22310 >seq156 Length=23114 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | | ||| |||||||| ||||| |||||||| ||||| || || | Sbjct 22139 CCACCTCTAAGTCTTAATACCAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGCT 22198 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | | | || || | || ||||| ||||| || | ||| |||||||| | || Sbjct 22199 AAGGTTCTTCCATCTTCTAGCTGCTTTCCTGCAAAGATAAGACGTTGCTGATCAGGAGGA 22258 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| |||||| | || |||| || | | || ||||| || Sbjct 22259 ATTCCTTCTTTGTCTTGAATTTT-AGCTTTTACATTCTCAATTGAATCAGAAGATTCTAC 22317 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTT 33753 || | || ||||| || ||||| | || || ||||| || |||||| || Sbjct 22318 ATCTAAGGTAATCGTCTTTCCTGTGAGAGTCTTAACAAAAATTTGCATATTT 22369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328693472021760