Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq2098 84.2 2e-11 seq1783 84.2 2e-11 seq235 84.2 2e-11 >seq2098 Length=47205 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||||| ||| || ||| || |||||||| ||||| |||||| ||| Sbjct 36172 GCGGGCATGGTCTAGTGGT-ATGACGACTGCTTCACACGCAGTAGGTCGTGGGTTCGATC 36114 Query 39838 CCCGGTGCCCGTATTT 39853 |||| ||||||||||| Sbjct 36113 CCCGCTGCCCGTATTT 36098 >seq1783 Length=63699 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||||| ||| || ||| || |||||||| ||||| |||||| ||| Sbjct 32743 GCGGGCATGGTCTAGTGGT-ATGACGACTGCTTCACACGCAGTAGGTCGTGGGTTCGATC 32801 Query 39838 CCCGGTGCCCGTATTT 39853 |||| ||||||||||| Sbjct 32802 CCCGCTGCCCGTATTT 32817 >seq235 Length=101317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||||| ||| || ||| || |||||||| ||||| |||||| ||| Sbjct 65311 GCGGGCATGGTCTAGTGGT-ATGACGACTGCTTCACACGCAGTAGGTCGTGGGTTCGATC 65253 Query 39838 CCCGGTGCCCGTATTT 39853 |||| ||||||||||| Sbjct 65252 CCCGCTGCCCGTATTT 65237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466109487800320