Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1842 91.5 1e-13 >seq1842 Length=60065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 112069 GCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATCT 112128 || ||| | |||||||||||||| || |||| ||||| |||||||| || |||| Sbjct 51992 GCTCCAAAATGTCTCCATTGGAAACCGTAAACTGGCCCTAGATCTCCAACTTCTCTATCA 51933 Query 112129 GGAAATTGCTCTCTATTCAACAAATCACTTCTAATATGAGGATTCCAAATCTTCACTCCT 112188 ||| | ||| || ||||| || || || | || ||| || | || ||| Sbjct 51932 TTAAAGCCGAGTTTATCTAAGAAATCCCTACTTCCATTTGCATCCCAGATATGGACACCT 51873 Query 112189 TTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACA 112248 |||| ||| || | ||||||||| ||||||||||||||||| | |||||| || Sbjct 51872 TTAGCACTTAATTCATTAGCATTTGTGCTTCCTCTAATAAACCATAAGAGTTCTTCAACC 51813 Query 112249 ACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAAAG 112291 || ||||||| ||||| ||| || || | | ||| |||| Sbjct 51812 ACTGCTTTCCAAAACACTAATTTTGTTGTAAATATTGGGAAAG 51770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391933046472364