Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq2116 87.8 2e-12 >seq2116 Length=46480 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/167 (72%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 137088 CCTGCTGCTGTGCCTGGTATTGTATTCTTATCTGGTGGATTAAGTGAAGAAGAAGCATCT 137147 ||||||||| ||||||| ||| | ||| | |||||| ||||||||||||||| ||| Sbjct 21698 CCTGCTGCTATGCCTGGAATTATGTTCCTTAGTGGTGGTCAAAGTGAAGAAGAAGCTTCT 21757 Query 137148 CTATATCTAAATGAGATGAA---TATTCTAAGTGTTGATAAACCATGGAATGTATCATTC 137204 | | | || |||| || || ||||| ||||| | | ||| ||| | | ||| Sbjct 21758 CAAGAGCTTAATGCTATTAATGCTATTCCTGGTGTTAAAAGACCTTGGGCTTTGAGTTTC 21817 Query 137205 TCATATGGTAGAGCACTACAACACTCTTGCCTAAAAGCATGGAGTGG 137251 |||| || |||||| ||||| | || ||| | ||||| ||||| || Sbjct 21818 TCATTCGGAAGAGCATTACAAGATTCATGCTTGAAAGCTTGGAGAGG 21864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631406457616480