Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2191 104 2e-17 seq114 100 2e-16 seq1260 98.7 7e-16 seq156 96.9 2e-15 seq1581 93.3 3e-14 seq2459 91.5 1e-13 seq1753 84.2 2e-11 >seq2191 Length=126925 Score = 104 bits (114), Expect = 2e-17 Identities = 168/237 (71%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| ||||| | |||| |||||| || ||| |||||||||||||| Sbjct 117405 TTGCATTCCACCTCTGAGTCTGAGGACCAAGTGAAGGGTTGACTCTTTTTGGATGTTGTA 117346 Query 44164 ATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 || || || || || | || || | ||||| || |||||||| | | || ||| Sbjct 117345 GTCAGCAAG--GGTTCTTCCATCTTCTAATTGCTTGCCTGCAAAGATAAGTCTTTGTTGA 117288 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGC 44280 || | ||| | |||||||| || ||||| |||| || | || | ||| | || | Sbjct 117287 TCAGGAGGAATGCCTTCCTTGTCTTGAATCTT-AGCTTTAACGTTTTCGATGCTATCAGA 117229 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || | || || |||||||| ||||| || || |||||||| ||||| Sbjct 117228 TGACTCAACATCTAAGGTTATTGTCTTTCCTGTGAGTGTTTTAACGAAGATCTGCAT 117172 >seq114 Length=105167 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | ||| || |||| |||||| || || ||||||||||||||||| || Sbjct 3448 CCACCTCTTAATCTTAAGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAATCAGCT 3507 Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | ||| | | || || |||||||| || |||||||| | |||||||| |||| || Sbjct 3508 AAGGTT--CTTCCATCTTCAAGCTGCTTTCCTGCAAAGATTAGGCGCTGCTGGTCTGGAG 3565 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||| || || || || ||| | | |||| | || | || | || || Sbjct 3566 GAATTCCTTCTTTGTCTTGGAT-TTTTGCCTTCACGTTCTCAATTGAATCAGAAGACTCT 3624 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || ||||||||||| || || ||||| || || |||||||| Sbjct 3625 ACATCTAAAGTTATCGTCTTTCCTGTAAGAGTCTTAACAAAAATTTGCAT 3674 >seq1260 Length=79673 Score = 98.7 bits (108), Expect = 7e-16 Identities = 170/241 (71%), Gaps = 7/241 (3%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || ||||| ||||| | || | |||||| || ||| ||||||||||| Sbjct 62855 TATTTGCATACCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGACTCTTTTTGGATGTT 62914 Query 44161 GTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 |||||| || || || || | || || | ||||| || |||||||| | | || Sbjct 62915 GTAATCAGCAAG--GGTTCTTCCATCTTCTAATTGCTTGCCTGCAAAGATAAGCCTTTGT 62972 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTC 44277 ||||| | ||| | ||||| || || ||||| ||| | || | || | ||| | || Sbjct 62973 TGATCAGGAGGAATGCCTTCTTTGTCTTGAATCTT-TGCCTTAACGTTTTCGATGCTATC 63031 Query 44278 GGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || | || || ||||| || ||||| || || |||||||||||||| Sbjct 63032 AGATGACTCAACATCTAGGGTTATTGTCTTGCCTGTGAGTGTTTTAACGAAGATTTGCAT 63091 Query 44338 G 44338 | Sbjct 63092 G 63092 >seq156 Length=23114 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| ||||| || |||| ||||| || || ||||| ||||| || || || Sbjct 22139 CCACCTCTAAGTCTTAATACCAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGCT 22198 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || || |||||||| || |||||||| | ||| |||||||| | || Sbjct 22199 AA--GGTTCTTCCATCTTCTAGCTGCTTTCCTGCAAAGATAAGACGTTGCTGATCAGGAG 22256 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||| || || || || |||| | ||| | || | || | ||||| Sbjct 22257 GAATTCCTTCTTTGTCTTGAATTTTA-GCTTTTACATTCTCAATTGAATCAGAAGATTCT 22315 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||||||||| ||||| ||||| || || |||||||| Sbjct 22316 ACATCTAAGGTAATCGTCTTTCCTGTGAGAGTCTTAACAAAAATTTGCAT 22365 >seq1581 Length=69860 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| ||||| || |||| |||||| || || ||||| ||||| || || || Sbjct 28548 CCACCTCTAAGTCTTAATACCAAGTGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGCT 28607 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || || |||||||| || |||||||| | ||||||||||| | || Sbjct 28608 AA--GGTTCTTCCATCTTCTAGCTGCTTTCCTGCAAAGATAAGGCGCTGCTGATCAGGAG 28665 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||||| || || || || ||| | | | || | || | || || | Sbjct 28666 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTTACATTCTCAATTGAATCAGAAGACTCTA 28725 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct 28726 CGTCTAAGGTAATTGTCTTTCCTGTGAGAGTCTTAACAAAGATTTGCAT 28774 >seq2459 Length=32074 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| | ||| || |||| || || || || ||||| |||||||| || || Sbjct 25514 CCACCTCTTAATCTTAAGACCAAATGGAGAGTCGATTCTTTTTGAATGTTGTAGTCAGCT 25573 Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || || |||||||| || |||||||| | ||||||||||| | || Sbjct 25574 AA--GGTTCTTCCATCTTCAAGCTGCTTTCCTGCAAAGATTAGGCGCTGCTGATCAGGAG 25631 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | ||||| || || || || ||||| | |||| | || | || | || || Sbjct 25632 GAATTCCTTCTTTATCTTGGAT-TTTTGCTTTTACGTTCTCAATTGAATCAGAAGACTCT 25690 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || ||||||||||| ||||| ||||| || || |||||||| Sbjct 25691 ACATCTAAAGTTATCGTCTTTCCTGTGAGTGTCTTAACAAAAATTTGCAT 25740 >seq1753 Length=65450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | |||| ||| | || ||| ||||||||||| || Sbjct 9906 TTGCATACCTCCTCTTAATCTAAGAACCAAGTGTAAAGTTGACTCTTTTTGGATGTTATA 9847 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || | | | || || ||||| || || ||||| || | | || ||||| Sbjct 9846 ATCAGCCAAAGTCCTTCCATCTTCAAGCTGTTTTCCAGCAAATATAAGCCTTTGTTGATC 9787 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | |||||| || || || || |||| || | || | ||| |||| | || Sbjct 9786 TGGAGGAATACCTTCTTTATCTTGGAT-TTTAGCTTTAACGTTTTCAATGCTGTCTGAGG 9728 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || | ||||| ||||| || || || ||||| || || || ||||| Sbjct 9727 ATTCTACATCAAGTGTAATAGTCTTACCAGTTAGAGTCTTGACAAAAATCTGCAT 9673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359978869957476