Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stentor_20coeruleus_20[genbank_20GCA_5F001970955.1_202017-01-25] 2,628 sequences; 77,831,160 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq317 127 3e-24 >seq317 Length=19370 Score = 127 bits (140), Expect = 3e-24 Identities = 379/589 (64%), Gaps = 22/589 (4%) Strand=Plus/Plus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 ||||| ||||||| ||| || |||||| ||||| ||||| | | || ||| ||| Sbjct 9563 TTTAATATTTGAACACGTCCAGCTTCATCAGGTAAGGATATTTCCACATGCATTTCTAAC 9622 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 | || |||||||| | |||||| ||||| | || ||| || |||||||| || | | Sbjct 9623 CTTCCTGGTCTTAAAATTGCTTCATCAATCATATCTTTTCTATTTGTCATACCAATAAGT 9682 Query 155991 AAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCG 156050 ||||| ||||||||||| | ||| || || ||||| || |||||||||||||| | | Sbjct 9683 AAAATATTGTTTAAAGAATTTACCCCATCGATTTTTGATAATAATTGATTGACAGCTGTA 9742 Query 156051 TCGTGCGTGGCGTTATCACCGC--------GTT-------TTTTACACAGAGCATCTATT 156095 || || | ||| ||| | ||| | |||| | |||||| ||| Sbjct 9743 TCATG---AACATTAGTACCTCCTGAAACTGTTCCTCTAGGTCTACAAATAGCATCAATT 9799 Query 156096 TCATCGAAGACGATAACGTGTAATCCGCTGGCTAAACCCAATTTNNNNNNNNNNNNNNNA 156155 ||||| ||||| |||| |||||| ||| ||||| ||| | Sbjct 9800 TCATCTAAGACAATAATATGTAATTTGCTTTTATCACCCATTTTTTCTTGCTCTTGTTCA 9859 Query 156156 GCCTCTTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAAT 156215 || |||| |||||| ||| | ||| ||| | || || || || || | |||| | Sbjct 9860 GCTTCTTTAAACAAATCTCTAATGTTTTGTTCTGTTTGTCCTACGTACTTATCAAATACT 9919 Query 156216 TCAGGACCGTTAACTATTTTGACGGGT--CGTGATTTAAAAGCTTGAGCGATACAGCGAG 156273 ||||| || || || ||||| || | || | ||||| | || || || | | Sbjct 9920 TCAGGGCCATTGACGATTTT--TGGTTCACGAGCTTTAAGACATTTTGCTATTTGTCTTG 9977 Query 156274 CCATTAATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTAC 156333 | ||||||||||| || || ||||| || || | | | ||| || ||||| | Sbjct 9978 CTATTAATGTTTTTCCTGTACCTGGAGGACCATAAAGAAGCATTCCACGTACATGTTGAA 10037 Query 156334 AACCTAATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAA 156393 || | |||| | | || || | || |||||||| ||||| || |||| Sbjct 10038 TTCCAAGCTTTTTAACAACTTGAGGTGGGAAAAGCCTTGAAGCAAAAGCTCTACGGAAAA 10097 Query 156394 TGAGAGAAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATT 156442 | |||| |||||| | || || || || | ||| | ||| || ||||| Sbjct 10098 TAAGAGCGAATTCTCTGTCTAAACCACCTATACCGAGTTCTTCGAAATT 10146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667053286579680