Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq13862 107 4e-18 seq15400 95.1 3e-14 >seq13862 Length=1040 Score = 107 bits (118), Expect = 4e-18 Identities = 70/76 (92%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765 ||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 216 GCTAGCCCGTCTAGCTCAGT-GGTAGAGCGCCAGACTTTTAATCTGGTGGTCGAGGGTTC 158 Query 165766 GAGCCCCACGATGGGC 165781 || |||| || ||||| Sbjct 157 GATCCCCTCGGTGGGC 142 >seq15400 Length=1765 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| | || |||| | |||||||||||||||||| Sbjct 194 GCCCGTCTAGCTCAGTCGGTAGAGCGCTTGGCTCTTAACCAAGTGGTCGTGGGTTCGAGC 253 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 254 CCCACGGTGGGC 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057555101139200