Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15602 122 9e-23 >seq15602 Length=1555 Score = 122 bits (134), Expect = 9e-23 Identities = 393/599 (66%), Gaps = 21/599 (4%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 ||||| ||||||||| || | || |||||||| || | ||| || || ||||| Sbjct 1058 AGACACGCGAAATCGGTGTGCATACCTTCGTCTCTTGAAATCAATTCATTTGAGAATGTG 999 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || ||||| || || ||||||| ||| || || | | ||| || ||||||||| Sbjct 998 AGACCTGGCATAAGACCACGCTTCTTTAGCCAGAAAATTGAGCAGAAGGAGCCAGAAAAG 939 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCG-TCTTTGTT 17139 ||||| ||||| || | ||| || || | | || |||||| | ||| ||| | Sbjct 938 AATATGCCCTCAACAGCTGCGAAGGCTACAAGTCTCTCGGCGAATTGAGCGGTCTCT--- 882 Query 17140 ACGAATCCATTTCTGCACCCACTCGGCTTTTT--GCTT-TA-TGCAATCCATCGTTTCTA 17195 | ||||||||| | |||| || ||||||| ||| || || || || || | Sbjct 881 -CCAATCCATTTGAGTGCCCAATCAGCTTTTTTAGCTACTACTGGTAT--ATTGTGGACA 825 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255 || || || | |||||||| ||| |||| | || | || || || || || Sbjct 824 --GCTTTGAAGAGAAATTCTTTTTCTTGTGGGTCACTAATTAAAGTGTCAATAAGAAGAG 767 Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315 || |||| ||| ||||||||||| ||||| ||||| || || |||| || | Sbjct 766 AATAAGTTTCACTGTGGATGTTCTCCATCATCATCTGGAATCCATAGAAACATCTAGCCT 707 Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375 | | | || | ||| | |||||| | || | |||||| || || || ||||| Sbjct 706 CAGGCACTTAGATTTCAGTGCAGAATCTCTGAGCCAAATTTTCATTAACTATACCGTCAG 647 Query 17376 TCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAA--GAA- 17432 || || || || || | | ||||||||| || | | | |||| ||| | || Sbjct 646 AAGCAGCAAAGAAGGCTAGAACATGCTTAATAAAGTGTCTCTCGT----TGTCATTGAGT 591 Query 17433 CGCGCC-AGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491 | | || | ||||| | ||| | | || ||| | |||||| | ||||| || |||| Sbjct 590 CTCTCCCAATCCTTAATATCAGTAGCTAGATCAATTTCTTCTGAAGTCCAGAATGCAGCC 531 Query 17492 ACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCT 17550 | | | ||| ||||| ||||| ||||||||||||| || || | | |||| |||| Sbjct 530 ATTTGATCTTTGTACATTTTCCAGATATCATTGTATTTGATAGGTAGGATAACAAATCT 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517417248691200