Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq15602 159 4e-34 >seq15602 Length=1555 Score = 159 bits (176), Expect = 4e-34 Identities = 396/594 (67%), Gaps = 9/594 (2%) Strand=Plus/Minus Query 16176 TATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGC 16235 ||| ||| | ||| || | | ||||||||||| ||| || | ||||||||||| Sbjct 1081 TATTGTTGATGTGCTTGTAGAGGAGACACGCGAAATCGGTGTGCATACCTTCGTCTCTTG 1022 Query 16236 TGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATA 16295 || | ||| || || || || | |||||||| || || ||||||| |||||| | Sbjct 1021 AAATCAATTCATTTGAGAATGTGAGACCTGGCATAAGACCACGCTTCTTTAGCCAGAAAA 962 Query 16296 TCGCAGCA-AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGT 16354 | | |||| || || || ||||||||||| |||||||||| ||| || || | | || Sbjct 961 TTG-AGCAGAAGGAGCCAGAAAAGAATATGCCCTCAACAGCTGCGAAGGCTACAAGTCTC 903 Query 16355 TCCGCGTACGTAGCA-TCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTT 16413 || ||| | ||| ||| | | ||||||||| || |||| || ||||||| Sbjct 902 TCGGCGAATTGAGCGGTCTCT----CCAATCCATTTGAGTGCCCAATCAGCTTTTTTAGC 847 Query 16414 TA-TACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTA 16472 || ||| || | | | || || || | |||||||| || || | | Sbjct 846 TACTACTGGT-ATATTGTGGACAGCTTTGAAGAGAAATTCTTTTTCTTGTGGGTCACTAA 788 Query 16473 TATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAA 16532 | | || ||||| || | | || |||| ||| |||||||| || ||||| | Sbjct 787 TTAAAGTGTCAATAAGAAGAGAATAAGTTTCACTGTGGATGTTCTCCATCATCATCTGGA 728 Query 16533 ATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGT 16592 |||||||||| |||| |||||| | | || | ||| | | |||| | |||| | Sbjct 727 ATCCATAGAAACATCTAGCCTCAGGCACTTAGATTTCAGTGCAGAATCTCTGAGCCAAAT 668 Query 16593 TCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATT 16652 | ||||| || ||||||||| |||||||| || || | | |||||||| || | | Sbjct 667 TTTCATTAACTATACCGTCAGAAGCAGCAAAGAAGGCTAGAACATGCTTAATAAAGTGTC 608 Query 16653 TTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTG 16712 | |||| | || | | |||||| || | ||| | | || ||| | |||||||| Sbjct 607 TCTCGTTGTCATTGAGTCTCTCCCAATCCTTAATATCAGTAGCTAGATCAATTTCTTCTG 548 Query 16713 GCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATT 16766 ||||| || ||||| | | ||| ||||||||||| ||||||||||||| Sbjct 547 AAGTCCAGAATGCAGCCATTTGATCTTTGTACATTTTCCAGATATCATTGTATT 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511287569228800