Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10217 111 1e-19 >seq10217 Length=2370 Score = 111 bits (122), Expect = 1e-19 Identities = 327/496 (66%), Gaps = 11/496 (2%) Strand=Plus/Plus Query 97131 CATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGC 97190 ||| ||||| |||| || ||||||||||| || ||||| || || || ||||||||| Sbjct 919 CATGCAAGTCAATAAGGAGTAGCTAGCAATATTGAAAGGAACACCAAGACCCATATCACA 978 Query 97191 TGATCTTTGATATAACTGACAGGAAAGCTTT---CCATCACACACATAAAACTGACTCAA 97247 |||||||| ||| | ||| ||||| || ||| || | || || || | | || Sbjct 979 TGATCTTTAATACATCTGGCAGGATAGTTTTTAGTCAGCGGTAACGTAGAATTAAGCTAA 1038 Query 97248 TACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAA 97307 || |||||| || || | |||||||| | |||| ||||||| || | ||||| Sbjct 1039 TATATGACAAGGAGGAAGAGCCATTTTCTTTAAATCTGCTGCATTCCAGGCGCTCATCAG 1098 Query 97308 CATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA--TCTGCTTTAATTGATCA 97365 |||||||| ||||| || | | || ||| |||| || || || |||||| Sbjct 1099 GATTCTTCTGCTAGTTGGATTGTTCTTAATTTAATTGATTACGTCAGC--TAGTTGATCG 1156 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 | |||| | ||||| | | | | ||| | ||||| ||||| |||||| Sbjct 1157 AATCCTTAATTAGTATAATCAGAATGCATAGTGTCGTATGCAGCTCCGAAATGTCTCCAT 1216 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 | || ||||| || || |||||||| | ||| ||||| || || |||| |||| Sbjct 1217 TAAAAGCCATAGACTGGCCCAAGGTCCCATTCCTCTCTTTCTTTCAAGCCAATTCCATCT 1276 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCA-CACCAGATGCTGCAAGCTCTTT 97544 || | | || || |||| ||||||| || | | | || | ||| | ||| Sbjct 1277 AAGAACTATCTTGAAGCATTACCATCCCAGATCTTTATTTTCTTAT-CACTAAGATTTTT 1335 Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604 | ||| |||| | | |||||| | | ||||| | ||||||||||| ||||| Sbjct 1336 TGCATTAGTGTCTCCTTTAACAAACCAGATTAGCTCTTCAGCTACACCTCTCCAGAATAC 1395 Query 97605 -TCTCTTAGTTGTTAA 97619 ||| ||||| ||||| Sbjct 1396 ATCT-TTAGTAGTTAA 1410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346700147628800