Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq15734 89.7 6e-13 seq5287 82.4 9e-11 >seq15734 Length=3152 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2179 CTCCGCGACCGGGAATTGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 2120 Query 60126 TACTACCGAGGATT 60139 ||||| || ||||| Sbjct 2119 TACTATCGCGGATT 2106 >seq5287 Length=1089 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||||||||||||||| | || || | | || || | |||||||| ||||| Sbjct 603 TCCTTTTGAATATTGTAATCTGAGAGGGTTCTACCATCTTCCAATTGCTTACCGGCGAAA 544 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||||| || || |||| || | | |||||||| | ||| |||| | ||| | | Sbjct 543 ATGAGTCTCTATTGATCGGGTGGGATTCCCTCCTTGT-CTTGAATTTTAGCTTTCACGTT 485 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||| | || ||||| | |||||||| ||||| || || ||||| || Sbjct 484 TTCAATGGTATCGGATGGCTCAACATCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTAAC 425 Query 43172 AAAGATTTGCAT 43183 ||||| | ||| Sbjct 424 GAAGATCTACAT 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571675789235200