Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq18108 100 2e-16 >seq18108 Length=1037 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 42892 AGTCTTAACACCAAATGGATAGT-GCTCTCCTTTTGCACATTGTAATCGGACAATGTACG 42950 ||||| | |||||| |||| || ||| || |||| || |||||||| || || || | Sbjct 624 AGTCTCAGCACCAAGTGGAGTGTTGCT-TCTTTTTATACGTTGTAATCTGATAAAGTCCT 566 Query 42951 TTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTC 43010 ||| || ||||| ||||| ||||| || | || || |||||| || || || ||||| Sbjct 565 GCTGTCCTCTAATTGCTTGCCTGCAAATATAATTCTCTATTGATCAGCGGGGACTCCTTC 506 Query 43011 TTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGT 43070 || || |||| |||| || || ||| | ||||| ||||||| || | || Sbjct 505 CTTGTCTTAGATCTTGGCTTTCACGCTCTCAATAGAGTCGCTAGCCTCGCATTCGAGAGT 446 Query 43071 TATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||||||||| || || ||| ||||| |||| ||| Sbjct 445 AATAGTTTTTCCAGTGAGGGTTCGGACAAATATTTACAT 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381277384830720