Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq6367 98.7 8e-16 seq55 82.4 6e-11 >seq6367 Length=732 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||||||||| ||||| |||||| |||||||| || | ||| || || | || ||| Sbjct 534 GATAAAGAAGGTATCCCCCCTGATCAACAAAGACTCATCTTTGCCGGAAAGTAGTTGGAA 475 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | |||| || | ||||| ||||| |||||||| || ||| | || |||| ||| Sbjct 474 GATGGAAGAACCTTGTCTGATTACAACATCCAAAAAGAATCAACTCTTCACTTGGTCTTG 415 Query 115499 AGATTGCGAGGAGG 115512 ||| | ||||||| Sbjct 414 AGACTTAGAGGAGG 401 >seq55 Length=1219 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || ||||| || ||||| || || ||||||||| |||| ||| ||| Sbjct 823 AATGCAAATCTTCGTCAAGACCCTCACCGGTAAGACCATTACCCTCGATGTTGAG-CCAT 881 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | || ||| ||| | | || || || || || || ||||| |||| |||| Sbjct 882 CAGATACTATTGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGAATCCCACCCGATC 941 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||||||| | || || || ||| | || |||| | ||| | | || |||| Sbjct 942 AACAAAGACTTATCTTCGCTGGTAAGCAACTTGAGGATGGAAGAACTCTTTCAGACTATA 1001 Query 115464 ACATTCAAAAAGAGTCTAC 115482 |||| ||||| ||||| || Sbjct 1002 ACATCCAAAAGGAGTCAAC 1020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425241151820800