Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq55 89.7 5e-13 >seq55 Length=1219 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | ||||||||||||| ||||||||||| || | || | ||||||| Sbjct 348 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCACTGAGGGTTCTGCCGTCCTCG 289 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 ||||| || || | | || || | ||||| || || || |||||||||||||| | Sbjct 288 AGTTGCTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGG 229 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || || || | | ||| | |||||| | | ||| || || | || | ||||| Sbjct 228 ATCTTGGCCTTGACATTTTCAATGGTGTCAGAGGGCTCAACGTCCAAGGTGATAGTTTTG 169 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || || || || ||||| Sbjct 168 CCAGTAAGGGTCTTAACGAAGATTTGCAT 140 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTC 138464 |||||||| | |||||||||||||||||||||||||||| | || | || | || || Sbjct 576 ACTAAATGGAGAGTTGACTCCTTTTGAATGTTGTAGTCGCTGAGGGTTCTGCCA-TCTTC 518 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||| || || | | |||| || | ||||| || || || || ||||| ||||| | Sbjct 517 AAGTTGCTTTCCAGCAAAGATAAGTCTTTGTTGATCGGGTGGGATTCCTTCCTTGTC-TT 459 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || | || | || | | || | |||||| | | ||| || || | || | || | Sbjct 458 GAATCTTAGCCTTGACATTCTCGATGGTGTCTGATGGCTCAACGTCAAGAGTGATGGTCT 399 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | ||||| || || || || || |||| ||| Sbjct 398 TTCCAGTGAGGGTCTTGACGAAGATCTACAT 368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496139326924800