Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq16138 100 3e-16 >seq16138 Length=3461 Score = 100 bits (110), Expect = 3e-16 Identities = 326/498 (65%), Gaps = 14/498 (3%) Strand=Plus/Minus Query 154614 GATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCA 154673 ||| | || ||| | ||||| ||| | ||| | | || || ||||||||| | | || Sbjct 1328 GATGCAATCTCACTTCAACCAAACTCTGGAGCCAACGGAGAATATGCAGGATTAATGGCT 1269 Query 154674 ATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAG 154733 || | ||| ||| || | ||| ||| ||||| || | || | || || | Sbjct 1268 ATTAAGAAATATCATGAAAGCAGAGGGGATCTCCAAAGAGATATTTGCCTTATTCCTGTT 1209 Query 154734 TCAGCACATGGAACTAATCCTGCTAGTGCTG-TCATGGCAGGGATGAAAGTTGTAGGTGT 154792 ||||| ||||| || || || || |||| || | | | |||||| | || | ||| Sbjct 1208 TCAGCTCATGGCACCAACCCAGCCTCAGCTGCTCTTTGTAAC-ATGAAAATCGTTGTTGT 1150 Query 154793 CAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCA----ATCA 154848 |||||||||| |||||||||| || || ||||||| | | ||||| | || Sbjct 1149 AAAGTGTGATGCCAATGGTAACATTGATGTCCAAGATCTTAAACAAAAAGCTGAAGAGCA 1090 Query 154849 TGAATACATTTGAACTGTCATGTATT-ATGATTACATACCCATCTACACATGGTGTATTT 154907 | | ||| || || | || ||| ||||||||||| ||||| || |||||||| || Sbjct 1089 TAAGGACA----AATTGGC-TGCATTCATGATTACATATCCATCCACTCATGGTGTTTTC 1035 Query 154908 GAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTT 154967 ||| || | | | | || || | || | ||| | || || || || || ||| | Sbjct 1034 GAAGCTGCCGTCATTGAAATGTGCGATATTATCCATAAAAACGGAGGGCAAGTCTATATG 975 Query 154968 GATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG-TGAGTATGGTGCAGA 155026 ||||| || || | ||||| | | ||| | | ||| | | || ||| || || Sbjct 974 GATGGTGCTAACTTCAATGCCTAAATGGGATTGACTTCCCCAGGATTTGT-TGGAGCCGA 916 Query 155027 TGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGG 155086 ||| | || | ||||| || || || |||| ||||| ||||| ||||| ||||| || Sbjct 915 TGTTGGCCACTTGAACTTGCACAAGACTTTCTCAATTCCCCATGGTGGTGGTGGTCCAGG 856 Query 155087 CGTAGGTCCTATAGGTGT 155104 || || || || || || Sbjct 855 TGTTGGCCCAATTGGAGT 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579069155225600