Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq10416 196 3e-44 seq13344 140 2e-27 seq55 132 3e-25 seq16720 123 2e-22 seq9085 113 3e-19 seq5287 111 1e-18 seq166 98.7 6e-15 seq18108 96.9 2e-14 seq2749 95.1 8e-14 seq6367 87.8 1e-11 seq3063 87.8 1e-11 seq2635 87.8 1e-11 seq14497 86.0 4e-11 >seq10416 Length=2541 Score = 196 bits (216), Expect = 3e-44 Identities = 391/574 (68%), Gaps = 4/574 (1%) Strand=Plus/Minus Query 475596 CAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTG 475655 |||| || || || ||||| | ||| |||||||| |||||| || ||| |||| Sbjct 1247 CAAGAGCCAAGTTCGAAGAACTCTGTATGGATCTCTTCAGAAAATGTATGCCACCAGTTG 1188 Query 475656 AACAAGTTCTCAGAGATTCTAAACTTGAC-AAATCACAAGTCCATGAAATTGTTCTTGTA 475714 || | || || | ||| | || |||| | ||| ||| | || ||| | || || || Sbjct 1187 AAAACGTCCTTAAGGATGCCAA-CTTGGCTAAAGGTCAAATTCACGAAGTCGTACTCGTC 1129 Query 475715 GGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAA 475774 |||||||| || ||||| || || | | ||||||| ||| | || || |||||| Sbjct 1128 GGAGGTTCCACTAGAATCCCCAAGGTTCAACAAATGCTCTCAGACTTCTTCAACGGTAAA 1069 Query 475775 AAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 | || | | || || ||||| || || || ||||| |||||||| ||||| Sbjct 1068 GTCCTCAACAGATCAATCAACCCAGATGAGGCCGTCGCCTATGGTGCTGCTGTTCAAGCT 1009 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAAC-TAAATAATATTGTACTTGTTGACGTAAC 475893 |||||| | | ||| | |||| || ||| | || || | | ||| | || || || Sbjct 1008 GCTATTCTCACTGGTGAGGGAGAC-AGCAACGTTAAGGATCTCCTCCTTCTCGATGTTAC 950 Query 475894 TCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAA 475953 ||||| ||| ||| |||| || | |||||| |||||||| || ||| ||||| Sbjct 949 CCCACTCTCAACTGGTATTGAGACCGCTGGAGGTGTTATGACTGTCCTCATTCCAAGAAA 890 Query 475954 TACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAAC 476013 ||| | |||||| ||| || || || | || |||| ||| |||| || ||| || Sbjct 889 CACTACCATCCCAACCAAGAAGTCTCAAATCTTCACCACCTATGCTGACAACCAACCAGG 830 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGG 476073 ||| || ||| |||| |||||||||||| | || || ||||| | || || Sbjct 829 TGTCTTGATTCAAGTCTTCGAAGGTGAAAGATCCATGACCAAGGATAACCATCTTCTCGG 770 Query 476074 AACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTAC 476133 | || || | |||||||| || || || || ||||||||||| ||||| ||||| || Sbjct 769 TAAATTCAACTTGGAAGGTATCCCACCAGCCCCAAGAGGAGTTCCACAAATCGAAGTCAC 710 Query 476134 TTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 ||| ||||||||||| || || || || || ||| Sbjct 709 TTTCGATATTGATGCCAACGGAATCCTCAACGTT 676 Score = 170 bits (188), Expect = 1e-36 Identities = 407/598 (68%), Gaps = 27/598 (5%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| |||||||| ||| | ||||| || ||| || || | ||| ||| || | || Sbjct 2128 TGCTATTGGTATAGATCTCGGAACCACATACTCATGCGTCGGTGTGTGGTCTAACGACAA 2069 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||||||||| || |||| || |||||||| | || || |||||||| || |||| || Sbjct 2068 AGTAGAAATCATCCCCAACGATCAAGGTAACAACACCACTCCATCATACGTCGCTTTCAC 2009 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 |||| ||| |||||||| ||||||||||| |||||| ||| || || || Sbjct 2008 TGAAGAAGAAAGACTTATTGGTGATGCTGCTAAGAATCAAGTTGCCAGAAACCCAAAGAA 1949 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTT---TGATGATACCACTGTCCA 474564 || | || |||||||| ||| | ||||| | || || ||| || || | || || Sbjct 1948 CACCGTCTTCGATGCTAAGAGACTTATTGGAAGAAAATTCTCTGA-GAAACAA--GTACA 1892 Query 474565 ATCTGATATGCGTCATTGGCCTTTTAAGGT-GATAAA--TGTTGGTGGTAAACCATATAT 474621 | || ||| |||||||| || ||||| || || || ||||| || ||| || Sbjct 1891 AGACGACATGAAGCATTGGCCATTCAAGGTCGAGCAAGGTGCTGGTGACAAGCCAGTCAT 1832 Query 474622 AGAAG--CAATACACGCAGGTGAAACTAAACAATTTTCAC-CGGAACAAATTTCTTCAAT 474678 | | | |||| | || || || || || || ||| | || |||| || || || Sbjct 1831 TGTTGTCGACTACAAG--GGAGAGAC-CAAGAAATTCCACGCTGAGGAAATCTCATCTAT 1775 Query 474679 GGTTTTAGCCAAAATGAAACAAACCGC-GA-GCTCATATCT--TGGACAAGAAGTAACTG 474734 ||| || | ||| ||||| ||| || || ||| || ||| ||| | | ||| Sbjct 1774 GGTATTGGTCAAGATGAAGGAAATTGCTGAGGCTTATCTCTCAAAGACCATCAAGAAC-- 1717 Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 || || || || || ||||| ||||| ||||| || ||| | ||||| || || |||| Sbjct 1716 --GCTGTTATCACCGTCCCAGCTTATTTCAATGACTCACAAAGACAAGCCACCAAGGATG 1659 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || | || ||||| | ||||| | | || || || || ||||| || ||||| Sbjct 1658 CTGGTACCATCTCAGGTATGAATGTCCTCAGAATCATCAACGAGCCAACTGCTGCCGCTA 1599 Query 474855 TTGCTTATGGTCTTGATAAGAATTC-TGACAA-AGAAGTAAATGTTTTAATCTTTGAT 474910 ||||||||||||| || ||||| || | ||| ||||| || ||| | ||||| ||| Sbjct 1598 TTGCTTATGGTCTCGACAAGAAATCATCCCAAGAGAAG--AACGTTCTCATCTTCGAT 1543 >seq13344 Length=4935 Score = 140 bits (154), Expect = 2e-27 Identities = 253/367 (69%), Gaps = 16/367 (4%) Strand=Plus/Plus Query 356235 TAATGAAGGCCAAAAACGATGAATTAAATTCATTATTAATCCTTTAATATGATATCCATC 356294 |||||| ||||| || ||||||| ||||| || | ||| ||||| ||||| ||||||| Sbjct 3130 TAATGATGGCCACAATTGATGAATGAAATTAATGACTAAGCCTTTTATATGTGATCCATC 3189 Query 356295 AACGTCTTGATCTGCTAAAATCATAATACTACCATACCT--AAGTTCTT----TAAGATC 356348 | |||| ||| || | |||||||||| ||||| || |||| || | ||| Sbjct 3190 ATGATCTTAATCAGCCATAATCATAATAGAGCCATATCTCAAAGTATTTATGTTTTGATT 3249 Query 356349 ATTATATACTTTTCCTTGCTCTAAACCAACAAttttttttATAGCAGTTATTTCTTCATT 356408 ||||||| | || | ||| |||| ||| || | ||| | ||||| ||||| Sbjct 3250 ATTATATTTAGTCCCAAGGAATAATCCAAGAATCTTAATGATATTTGAAATTTCATCATT 3309 Query 356409 ACTTGCGAC-----AATTGCTGGACTTTTGGTTCTTACATTTAGTGGTTTTCCTTTTAAT 356463 ||| | | ||| | || | ||||||||||| | ||| ||||| | | Sbjct 3310 ---TGCAAGGGCTTATTTGAT--ACCAATATCTCTTACATTTATTAATTTACCTTTGAGT 3364 Query 356464 GGGAAAATACCATAATAATCTCTTCCGACAACATTTAATCCAGACATAGCAAATGCTTTA 356523 || || | ||||||||||||||||| ||||| | | || ||| || |||| ||| Sbjct 3365 GGAAATACTCCATAATAATCTCTTCCAACAACCTAAATACCGCTCATTGCTAATGATTTT 3424 Query 356524 GCTGAATCTCCTTCAGTAAGAATTAAAGTACATTTATATCCTTCTTTTGTTCCAGCTTTA 356583 |||||||||||||| || | || || || |||||| ||| |||||||||||||| Sbjct 3425 GCTGAATCTCCTTCTGTTAAGATCAAGGTGCATTTACTAGATTCACTTGTTCCAGCTTTA 3484 Query 356584 TGAGCAT 356590 | ||||| Sbjct 3485 TTAGCAT 3491 >seq55 Length=1219 Score = 132 bits (146), Expect = 3e-25 Identities = 137/177 (77%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || | |||||||| ||| ||||||||||| ||||| || ||||| | |||| Sbjct 1002 TTATAGTCTGAAAGAGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAGATAAGTCTTTGT 943 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || || |||||||||||||| | ||||| ||||| |||||||||||| Sbjct 942 TGATCGGGTGGGATTCCTTCCTTGTCCTAGATCTTGGCCTTGACGTTTTCAATAGTATCT 883 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | || || |||||||| || ||||||||||| ||||| ||||| ||||| Sbjct 882 GATGGCTCAA-CATCGAGGGTAATGGTCTTACCGGTGAGGGTCTTGACGAAGATTTG 827 Score = 123 bits (136), Expect = 2e-22 Identities = 126/162 (78%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||||| |||||||||||||||||||||||| ||||| | ||||||||| || || Sbjct 534 AGGGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATAAGTCTTTGTTGATCGGGTGGG 475 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGT 480724 ||||||||||||||||||||||| |||||| || || || || | || | || Sbjct 474 ATTCCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATGGTGTCTGATGGCTCAA-C 416 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 ||||| || || || || || ||||| ||||| ||||| || Sbjct 415 GTCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGAT 374 Score = 120 bits (132), Expect = 2e-21 Identities = 127/165 (77%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 || |||||| || || |||||||||||||| ||||| || | ||||||||| || || Sbjct 306 AGGGTTCTGCCGTCCTCGAGTTGCTTTCCAGCGAAAATGAGTCTTTGTTGATCGGGTGGG 247 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTG-TGAAGT 480724 || ||||| |||||||| ||||| |||||| |||||| || |||| | | | || Sbjct 246 ATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCAGAGGGCTCAACG 187 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| | |||||||| || || || ||||||||||| ||||| Sbjct 186 TCCAAGG-TGATAGTTTTGCCAGTAAGGGTCTTAACGAAGATTTG 143 >seq16720 Length=5037 Score = 123 bits (136), Expect = 2e-22 Identities = 323/486 (66%), Gaps = 9/486 (2%) Strand=Plus/Minus Query 297112 GATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTTGGAAATCTGAT 297171 || ||||| | ||||||| ||||||||||| | ||||| ||||| ||| ||| || Sbjct 2245 GACTGGTGCTTCTCAAGAAACAGATATTGGGGTAATCCAATCCCAATCTGGGCATCAGAG 2186 Query 297172 GATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAATTTTCAGGAATT 297231 ||| |||||||| || ||| |||||||| || | ||| | ||||||| |||||| | Sbjct 2185 GATATGGAAGAAATCATCTGTGTTGGTTCAATTAAGGAACTTTAAGAATTATCAGGATGT 2126 Query 297232 GATAATATTAATGATTTACATATTGATAAAATTGATCAAATAAAAATTCCTTCTCGTAAA 297291 | | || | ||||| || | || |||||| | || | ||||| || | Sbjct 2125 GGAGAAATCACAGATTTGCACAGAGAGTTTATTGATAACATTACCATTCCCTCAAAGATG 2066 Query 297292 GGAAAAGGCATGTTATCTCGTGTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCT 297351 || ||||| |||| | || | | ||||| ||||| ||||||||||| || ||| Sbjct 2065 GGCAAAGGAGAGTTAAGAAGAATTCCAGAAGTTTTTGATTGCTGGTTTGAATCTGGATCT 2006 Query 297352 ATGCCTTATGGTCAAATTCATTATCCTTTTGAAAATTCCGAAATTTTAGACACTTC-ACA 297410 ||||| | || | || ||||| || || | | || || ||||| ||| Sbjct 2005 ATGCCATTTGCTTAAGCACATTACCCATTCTCTATTAGTGA----GGAG-GACTTCAACA 1951 Query 297411 AGA-TTATATTGCAGATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATA 297469 ||| | ||| | || || | || | | |||||||||||||| ||||| |||| Sbjct 1950 AGAGATTCCCTGCTAACTTCATTGCTGAGGGATTAGATCAAACAAGAGGATGGTTCTATA 1891 Query 297470 CTTTATTAGTTCTTTCTACAGCTATATTTAACAAACCAG-CATTTAAAAATGTAATTGTT 297528 || | | ||| | || |||||| | | | | || |||| ||||| | ||||| Sbjct 1890 CTCTGATGGTTATCTCAACAGCTGT-TAAAGGCTGCGAGCCATTCAAAAACCTTATTGTC 1832 Query 297529 ACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGTCAAAAAGTAAAGGTAATTATCCT 297588 | || ||||| || | ||||| |||| |||||||| ||||| |||||||| Sbjct 1831 AATGGTATTGTATTAGCTGAGGATGGTTAAAAGATGTCAAAGAGTAAGAAAAATTATCCA 1772 Query 297589 GATCCA 297594 |||||| Sbjct 1771 GATCCA 1766 >seq9085 Length=2287 Score = 113 bits (124), Expect = 3e-19 Identities = 253/378 (67%), Gaps = 14/378 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || ||||| ||||| || ||||| ||| ||||| | |||| || ||||| | ||| Sbjct 916 GTCAATCCAGATGAGGCCGTTGCTATTGGTGCTGCAATTCAAGGTGCCGTTTTAACTGGT 857 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTG-ACGTAACTCCACTTTCATTAGG 475908 ||| | || ||||| | ||| ||| | || || |||||||| | || Sbjct 856 ---------GAGG---TTAAGGATATTCT-CTTATTGGATGTTACCCCACTTTCCCTCGG 810 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 |||||| || ||||||| | |||||||| | ||| | |||||||| | |||||| Sbjct 809 TCTTGAGACTCTTGGAGGTGTCATGACTAAATTGATTCAAAGAAATACAACCATCCCAAC 750 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| || || |||| || || ||| | ||||||||||||| | || | ||| | | Sbjct 749 CAAGAAGTCCCAAGTTTTCTCTACTGCTGCTGATAATCAAACCAAGGTCTCAATCAAGGT 690 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 | |||| || ||| || | || ||||| || | || ||| || | || | Sbjct 689 TTACCAAGGAGAGAGAGAAATGGCTGCTGATAACAAATATCTAGGAGAATTCGAGCTCGG 630 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 ||||||||| || || ||||| || |||||||||| | |||||||| ||||| Sbjct 629 AGGTATTCCAATGGCACCAAGAGGTCACCCATAAATTGAAGTCTCATTTGATATCGATGC 570 Query 476149 AAATGGTATTCTTAATGT 476166 || ||||| | ||||| Sbjct 569 CAACGGTATCATGAATGT 552 Score = 96.9 bits (106), Expect = 2e-14 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 474713 TATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCT 474772 |||||||| | ||| | || || || |||| || ||||| ||||| |||||||| Sbjct 1606 TATCTTGGTAAGTCAGTGAAAGAAGCTGTCGTTACCGTACCAGCTTATTTCAATGATTCA 1547 Query 474773 CAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATT 474832 ||| | ||||||||||||||||| || | || ||| |||| | || | |||||| Sbjct 1546 CAAAGACAAGCAACTAAAGATGCTGGTAAGATCGCAAATCTTGAGGTAAAGAGAATTATT 1487 Query 474833 AATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 || || ||||| || || || ||||| | |||| | ||||||| Sbjct 1486 AACGAGCCAACCGCTGCTGCTCTTGCCTTTGGTTTAGATAAGA 1444 >seq5287 Length=1089 Score = 111 bits (122), Expect = 1e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 ||||| || | |||||||| || ||||||||||| || || || ||||| | |||| Sbjct 819 TTATAGTCTGAAAGAGTTCTTCCGTCCTCAAGTTGCTTACCTGCGAAGATAAGTCTTTGT 760 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || ||||| ||||| ||||| | |||||| ||||| |||||||| || Sbjct 759 TGGTCGGGTGGAATACCTTCTTTGTCCTAAATCTTGGCCTTGACGTTCTCAATAGTGTCT 700 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | || ||||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 699 GATGGTTCAACGTCGAGGGTGATAGTCTTACCGGTGAGGGTCTTGACGAAGATTTG 644 Score = 98.7 bits (108), Expect = 6e-15 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 480580 TTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAA 480639 || |||| ||| ||| ||||| | || ||||| |||||| | |||||| || || | Sbjct 604 TTCCTTTTGAAT-ATTGTAATCTGAGAGGGTTCTACCATCTTCCAATTGCTTACCGGCGA 546 Query 480640 AAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAG 480699 |||| || | | |||||| || || ||||| |||||||||||||| || ||| || Sbjct 545 AAATGAGTCTCTATTGATCGGGTGGGATTCCCTCCTTGTCTTGAATTTTAGCTTTCACGT 486 Query 480700 CTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTA 480758 |||||| ||||| | || | || ||||| || || || || ||||| || |||||| Sbjct 485 TTTCAATGGTATCGGATGGCTCAA-CATCAAGAGTGATGGTCTTGCCGGTAAGGGTCTTA 427 Query 480759 ACGAAAAT 480766 ||||| || Sbjct 426 ACGAAGAT 419 >seq166 Length=1485 Score = 98.7 bits (108), Expect = 6e-15 Identities = 249/368 (68%), Gaps = 28/368 (8%) Strand=Plus/Minus Query 629936 CATTTTTTATTTTATGGACCTCCTGGTACAGGTAAAACATCTGCAATTTTAGC--TATGG 629993 ||||| | |||||||| ||||| || ||||| |||||||| |||| ||||| ||| Sbjct 1219 CATTTGATGTTTTATGGTCCTCCAGGCACAGGAAAAACATCAACAATATTAGCATTATCT 1160 Query 629994 GACGAGAAATATTTAAAGAACA--TTTTCCAAC-GAGAGTAATAGAATTTAATGCCTCTG 630050 | ||| ||||| || | ||||| ||| |||||| |||||| |||||||||||| Sbjct 1159 AAGGAGT--TATTTGGAGGTGAGTTTTTCAAACAGAGAGTCATAGAACTTAATGCCTCTG 1102 Query 630051 ATGATAGAGGAATTAATGCAGTTAGAGAAAAAATAACAAACGAAGCTAAAAAATATGTCA 630110 |||| ||||| || | ||| || |||||| ||| || ||| | | | Sbjct 1101 ATGAAAGAGGTATAGCAGTAGTGAGGGAAAAAGTAAAGAAATTTGCTTAGAGA------- 1049 Query 630111 CAAGTATTATAA--ATCCTGATGGAACTATCA---TTCCATCTTATAAAATAATTATTCT 630165 ||| | ||| |||| ||| || | ||| |||| | | | || ||||| | Sbjct 1048 -AAGATTGCTAAGCATCCAGATTCAAATTTCAACTGTCCAAGTATTTAGATTGTTATTTT 990 Query 630166 AGACGAAGCTGATTCTATGACTGATGAAGCACAAGATGCT-TTACGAGTTATTATCGAAC 630224 |||||| || ||||| |||||| ||| || ||| ||| ||| ||| || || ||| Sbjct 989 AGACGAGGCAGATTCAATGACTATTGATGCTTAAGCCGCTCTTAGGAG-AATAATTGAAT 931 Query 630225 AGTATAGCACAA-CA--ACAAGATTTTGTTTTATTTGTAATTATATAACAAAAATTACGG 630281 | || | ||| || || ||||| || |||||||||| || || ||||||| | | Sbjct 930 AATA---CTCAAGCAATACCAGATTCTGCATTATTTGTAACTACATTTCAAAAATCATAG 874 Query 630282 ATGCGATT 630289 || || || Sbjct 873 ATCCGCTT 866 >seq18108 Length=1037 Score = 96.9 bits (106), Expect = 2e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480591 ACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGT 480650 |||||||| |||| || |||||| |||||| | || || |||||||| ||||| | Sbjct 360 ACATTATAGTCAGAGAGGGTTCTGCCATCTTCTAACTGTTTGCCAGCAAAGATAAGTCTC 301 Query 480651 TGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTA 480710 |||| || | || || |||||||||||||| ||||| ||||| | |||| ||| Sbjct 300 TGTTAGTCGGCTGGTATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGGACTCAAAAGTC 241 Query 480711 TCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 || || | | |||||||||||| || || || ||||| || | || ||||| Sbjct 240 TCGTTGGCTTCACATTCAAGGGTAATTGTCTTTCCAGTGAGTGTTCTTACAAAAAT 185 >seq2749 Length=2166 Score = 95.1 bits (104), Expect = 8e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||||||| ||| |||||||| || | |||||| | || || || |||||||| || Sbjct 554 GATTTTTCAAGTCCTAATATTGCTAAAAACATGCATGTCGGCCATTTAAGATCTACCATT 613 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 || || |||||||| | | ||||| |||| ||| || ||||| ||| Sbjct 614 TAAGGAGATAGCATTTGTAGAGTTTTAGAATTCATGGGATATGATGTTTTAAGAACAAAC 673 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCA 817261 || | |||||||||||||| |||||||| ||||| |||||| Sbjct 674 CACTTAGGTGATTGGGGAACTCAATTTGGAATGTTGATTGCA 715 >seq6367 Length=732 Score = 87.8 bits (96), Expect = 1e-11 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| | ||||| |||||| | | |||||| ||||| || || | |||| Sbjct 449 TTGTAATCAGACAAGGTTCTTCCATCTTCCAACTACTTTCCGGCAAAGATGAGTCTTTGT 508 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || || ||||| || || |||||||| || || || || |||||| Sbjct 509 TGATCAGGGGGGATACCTTCTTTATCCTGAATCTTGGCCTTAACGTTCTCGATGGTATCA 568 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAAT 480766 | | | ||||| |||||||| ||||| || | |||||| ||||| || Sbjct 569 GAGGGCTCGACATCAAGAGTAATAGTCTTACCCGTCAAAGTCTTGACGAAGAT 621 >seq3063 Length=5856 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 318694 ACAGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACA 318753 |||||| |||||| | ||| | | |||||||| ||||| | | |||||| | | Sbjct 3105 ACAGTATTATCATAATTCACCATCACATCTTCTAAAGCTTTAATAAGTCTTCTTTAAATA 3164 Query 318754 TAACCTGTGTCTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACT 318813 || || || || | ||||||| ||||||| ||||| ||| ||||| ||| ||||| | Sbjct 3165 TACCCAGTCTCAGATGTTTTAACTGCAGTATCAATAAGACCCTCTCTGCCTCCCATAGCG 3224 Query 318814 TGGAAAAAGAATTCAG 318829 ||||||||||| |||| Sbjct 3225 TGGAAAAAGAACTCAG 3240 >seq2635 Length=2223 Score = 87.8 bits (96), Expect = 1e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 753119 ATAATTTTCAATGATACCATTATGAACCATAGCTAATTTTTTATTTTCATCAGTGTGGGG 753178 |||||||||||||| ||||| || || | |||| ||||||| ||| ||| ||| || Sbjct 1655 ATAATTTTCAATGAATCCATTGTGTACAAGTGCTATTTTTTTACTTTGATCTAGGTGAGG 1714 Query 753179 ATGAGCATTTTCCACAGTTTTTTCACCATGTGTTGCCCATCTTGTATG 753226 || |||||||| |||||||| ||||| ||||||||||| || || Sbjct 1715 GTGCGCATTTTCGTGAGTTTTTTATCCATGAGTTGCCCATCTAGTGTG 1762 >seq14497 Length=10371 Score = 86.0 bits (94), Expect = 4e-11 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 318645 ACCATTATCACCATAAACACATTGAATCAATTTATCATTAGCAT-TTCTTACAGTACCAT 318703 ||||| ||| || || | ||| ||||| | ||| | || | |||| ||||| | | Sbjct 6804 ACCATCATCTCCGTATTAAAATTAAATCACATGCTCAGT-GCTTGTTCTGACAGTGTCGT 6746 Query 318704 CATATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTGT 318763 |||| | ||| | ||| |||| | || | |||| ||||||| | |||||| || | Sbjct 6745 CATACTTTACTGATAGATCCTCTAATGCCTTCATTAATCTTCTTTGCATATAACCAGTCT 6686 Query 318764 CTGCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAAGA 318823 |||||||||| | || |||| | || ||||||||| ||| | ||| ||||| |||| Sbjct 6685 CTGCAGTTTTGACTGCTGTATCTACAAGACCTTCTCTACCTCCAATAGTATGGAAGAAGA 6626 Query 318824 ATTCAG 318829 |||||| Sbjct 6625 ATTCAG 6620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267328166136320