Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6367 109 5e-19 seq55 96.9 3e-15 >seq6367 Length=732 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||| | || || ||||| ||||| || || || || ||||| | || ||||| Sbjct 630 AAAATGTAGATCTTCGTCAAGACTTTGACGGGTAAGACTATTACTCTTGATGTCGAGCCC 571 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| ||| | || || |||||| || |||||||| | ||| ||| Sbjct 570 TCTGATACCATCGAGAACGTTAAGGCCAAGATTCAGGATAAAGAAGGTATCCCCCCTGAT 511 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||||| || | ||| || || || |||| |||| ||||| || | |||||| Sbjct 510 CAACAAAGACTCATCTTTGCCGGAAAGTAGTTGGAAGATGGAAGAACCTTGTCTGATTAC 451 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||||||||| || | ||| |||| || ||||| |||| || Sbjct 450 AACATCCAAAAAGAATCAACTCTTCACTTGGTCTTGAGACTTAGAGGAGG 401 >seq55 Length=1219 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | ||||| || ||||||||| |||| ||||| Sbjct 823 AATGCAAATCTTCGTCAAGACCCTCACCGGTAAGACCATTACCCTCGATGTTGAGCCATC 882 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || || ||||| ||||| ||||| | || ||||| Sbjct 883 AGATACTATTGAAAACGTCAAGGCCAAGATCTAGGACAAGGAAGGAATCCCACCCGATCA 942 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||||||||||| | || ||||| || || ||||||| ||||| | | || || || Sbjct 943 ACAAAGACTTATCTTCGCTGGTAAGCAACTTGAGGATGGAAGAACTCTTTCAGACTATAA 1002 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| ||||| || || || | ||| |||| | ||||| |||| || Sbjct 1003 CATCCAAAAGGAGTCAACCCTTCACTTGGTTCTCAGACTCAGAGGTGG 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412741774901120