Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq13344 95.1 2e-14 >seq13344 Length=4935 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 || ||||||||| |||| || ||||| |||||| |||||| ||| | ||||||||| Sbjct 2625 ATCAAGGTTGCTTAGTTATCAGGCTACATAGCAGAATAAACTGCCTATCATCATGGTGAA 2566 Query 172946 CAAAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACATA 173005 | |||| ||||| |||| | || |||| |||||||||| ||||| || Sbjct 2565 ATGAGTCTTTAAATGACTATTGTAAATATGGCCTAGGACTTTGTAGGTAGTAATAATTTA 2506 Query 173006 ACATTACTTGAA-CCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGATTCAGC 173064 | || ||| | ||| |||| | ||||| || ||| | ||||||||||| ||||| Sbjct 2505 A-ATCTCTTAATGCCAATTGGTTAATTTGGGACCAGAATGATGGGAGGTAAAGACTCAGC 2447 Query 173065 CGCATCAAGGTATATTTATACTAA 173088 | || | || || |||| |||||| Sbjct 2446 CTCAGCTAGATACATTTTTACTAA 2423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655117490560000