Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq15602 84.2 2e-11 >seq15602 Length=1555 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 59989 TAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGC 60048 |||| || ||| || || || || ||||| |||||||| ||||| | |||||||||| Sbjct 911 TAGCCTTCGCAGCTGTTGAGGGCATATTCTTTTCTGGCTCCTTCTGCTCAATTTTCTGGC 970 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 | || |||||||| || ||||| || || | ||||| || || ||||||| | |||| Sbjct 971 TAAAGAAGCGTGGTCTTATGCCAGGTCTCACATTCTCAAATGAATTGATTTCAAGAGACG 1030 Query 60109 AGGG 60112 | || Sbjct 1031 AAGG 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548388765849600