Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq15602 170 2e-37 >seq15602 Length=1555 Score = 170 bits (188), Expect = 2e-37 Identities = 389/577 (67%), Gaps = 25/577 (4%) Strand=Plus/Minus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 ||||| || || |||||||||||| || ||||| | |||||||| | || || || Sbjct 1034 CCTTCGTCTCTTGAAATCAATTCATTTGAGAATGTGAGACCTGGCATAAGACCACGCTTC 975 Query 23590 TTAATCCAAAATATTGCAGCA-AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAA 23648 || | ||| || |||| |||| || || || |||||||| || ||||||||||| || || Sbjct 974 TTTAGCCAGAAAATTG-AGCAGAAGGAGCCAGAAAAGAATATGCCCTCAACAGCTGCGAA 916 Query 23649 GGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATT 23708 ||| ||||| | | ||| || | | || |||||||| || ||||| Sbjct 915 GGCTACAAGTCTCTCGGCGAATTGAGCGGTCTCTCCA---ATCCATTTGAGTGCCCAATC 859 Query 23709 AGCCTTCAATTTTACACACTCAATTGTTTCAATTG-------CTTTTAAGAGAAAAGTTT 23761 ||| || |||| ||| | | || | |||| |||| |||||||| || Sbjct 858 AGCTTT----TTTAGCTACT-ACTGGTAT--ATTGTGGACAGCTTTGAAGAGAAATTCTT 806 Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 |||||| || | || | || ||||| || | | ||| ||||| || || | Sbjct 805 TTTCTTGTGGGTCACTAATTAAAGTGTCAATAAGAAGAGAATAAGTTTCACTGTGGATGT 746 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881 | || || ||||| || ||||| ||||||||||| |||| || || | ||| | Sbjct 745 TCTCCATCATCATCTGGAATCCATAGAAACATCTAGCCTCAGGCACTTAGATTTCAGTGC 686 Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 | ||||| | ||| |||||||| ||||| ||||| ||| |||||||||||| || |||| Sbjct 685 AGAATCTCTGAGCCAAATTTTCATTAACTATACCGTCAGAAGCAGCAAAGAAGGCTAGAA 626 Query 23942 CATATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTT 23998 ||| || ||||| ||||| || ||| ||| | | | | |||||| |||||||| Sbjct 625 CATGCTTAATAAAGTGTCTCTCGTTGTCA-TTG--AGTCTCTCCCAATCCTTAATATCAG 569 Query 23999 TTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCC 24058 | | || ||||| ||| || ||||| || |||| | || |||||| || Sbjct 568 TAGCTAGATCAATTTCTTCTGAAGTCCAGAATGCAGCCATTTGATCTTTGTACATTTTCC 509 Query 24059 AAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 | |||||||| | || || || | || || ||||| Sbjct 508 AGATATCATTGTATTTGATAGGTAGGATAACAAATCT 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521358670976000