Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stylonychia_20lemnae_20[genbank_20GCA_5F000751175.1_202014-09-07] 19,840 sequences; 50,164,522 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq6529 89.7 7e-13 >seq6529 Length=3980 Score = 89.7 bits (98), Expect = 7e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 63727 AAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCTCA 63785 ||| | |||||| | ||||||| | || || ||||||||||| | | ||| | | Sbjct 894 AAAATGAGATCTGAAAGAATACCACAGATTGGAGATAAATTTGC-TAGTAGACATGGATA 836 Query 63786 AAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTAT 63845 ||||||||| ||| |||| |||| || || |||||||| ||||| | ||| || || Sbjct 835 AAAAGGTACAGTTGGAATGACTTATAGAATGGAGGATATGCCATTTACAAGAGAGGGCAT 776 Query 63846 CGTACCCGATCTCGTCATCAATCCACACGCT 63876 |||||| |||||| | |||||||| || ||| Sbjct 775 CGTACCTGATCTCATAATCAATCCTCATGCT 745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666909765350400