Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq691 87.8 4e-12 seq1075 84.2 5e-11 >seq691 Length=396543 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||| ||||||| || | |||| || |||||||||||||||||| Sbjct 286354 GCCCGCCTAGCTCAGTCGGCAGAGCGCAAGGCCCTTAACCTTGTGGTCGTGGGTTCGAGC 286413 Query 165770 CCCACGATGGG 165780 |||||| |||| Sbjct 286414 CCCACGGTGGG 286424 >seq1075 Length=250942 Score = 84.2 bits (92), Expect = 5e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535 ||||||||||| ||||| || || ||| | || || || || ||| || | | | Sbjct 199358 CAGTACATCGAGTTCGTCGCAGATCGCCTGTTGACGGCCCTGGGACACGGCAAGATCTTC 199417 Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595 |||||| |||||||| | | |||||| | || || || || || |||||||||||| Sbjct 199418 AACTCTTCCAACCCCTTCGATTGGATGGAGATGATCTCCCTGCAGGGCAAGACCAACTTC 199477 Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTG 230629 ||||| ||||| ||| | || || |||| || || Sbjct 199478 TTCGAGAAGCGCGTCGGAGAATACCAGAAGCTTG 199511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057692694951440