Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq342 143 3e-29 seq662 113 5e-20 seq97 113 5e-20 seq6891 82.4 9e-11 seq465 82.4 9e-11 >seq342 Length=642287 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| || |||| |||||| |||| ||| ||||| || || |||||||| | Sbjct 493376 CCGCCTCGCAAGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGAA 493435 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || ||| |||| ||||||||||| |||||||| || || ||||||||||||| ||| Sbjct 493436 AGGGTACGCCCGTCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 493495 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| ||| || |||| | | | |||||| || | || ||| Sbjct 493496 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCACTGGCCTCAACA 493555 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || |||||||| | ||||| |||||||| ||||| Sbjct 493556 TCCAAGGTGATCGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 493602 Score = 136 bits (150), Expect = 5e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| ||| ||||| || || |||||||| | ||| || ||| || Sbjct 493616 CGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGACAGGGTACGCCCG 493675 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||||||||| |||||||| || || ||||||||||||| || | || |||||| Sbjct 493676 TCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCTTCCTTG 493735 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || || || | ||||| Sbjct 493736 TCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCACTGGCCTCAACGTCCAAAGTGATC 493795 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| | ||||| |||||||| ||||| Sbjct 493796 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 493830 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| || |||| |||||| || | ||| ||||| || || |||||||||| Sbjct 475596 CCACCTCGCAAGCGCAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGAA 475655 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| ||||||||||| |||||||| || || ||||||||||||| || Sbjct 475656 AGGGTACGGCCGTCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGTGGG 475715 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| ||| || |||| | | | |||||| || | || || Sbjct 475716 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATCGTGTCACTGGCCTCAACG 475775 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || |||||||| | ||||| |||||||| ||||| Sbjct 475776 TCCAAGGTGATCGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 475822 Score = 129 bits (142), Expect = 7e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| || ||||| || || |||||||||| || || || || Sbjct 476292 CGCAGCACCAAGTGCAGGGTCGATTCCTTCTGGATGTTGTAATCAGAAAGGGTACGGCCG 476351 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||||||||| |||||||| || || ||||||||||||| || | || |||||| Sbjct 476352 TCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCTTCCTTG 476411 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || || || | ||||| Sbjct 476412 TCCTGGATCTTAGCCTTGACATTATCGATCGTGTCACTGGCCTCAACGTCCAAGGTGATC 476471 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || |||||||| | ||||| |||||||| |||||| Sbjct 476472 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCATT 476507 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| || ||||| || || |||||||||| || || || || Sbjct 475836 CGCAGCACCAAGTGCAGGGTCGATTCCTTCTGGATGTTGTAATCAGAAAGGGTACGGCCG 475895 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||||||||| |||||||| || || ||||||||||||| || | || |||||| Sbjct 475896 TCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCTTCCTTG 475955 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || || || | ||||| Sbjct 475956 TCCTGGATCTTAGCCTTGACATTATCGATCGTGTCACTGGCCTCAACGTCCAAGGTGATC 476015 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| | ||||| |||||||| ||||| Sbjct 476016 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 476050 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| || ||||| || || |||||||||| || || || || Sbjct 476064 CGCAGCACCAAGTGCAGGGTCGATTCCTTCTGGATGTTGTAATCAGAAAGGGTACGGCCG 476123 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||||||||| |||||||| || || ||||||||||||| || | || |||||| Sbjct 476124 TCCTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCTTCCTTG 476183 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || || || | ||||| Sbjct 476184 TCCTGGATCTTAGCCTTGACATTATCGATCGTGTCACTGGCCTCAACGTCCAAGGTGATC 476243 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| | ||||| |||||||| ||||| Sbjct 476244 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 476278 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| || |||| ||||| || | || ||||| || || |||||||| | Sbjct 509315 CCGCCTCGCAAGCGCAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGAA 509374 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| ||||||||||| || ||||| || |||||||||||||||| || Sbjct 509375 AGGGTACGGCCGTCCTCTAGCTGCTTGCCCGCGAAGATCAGTCGCTGCTGGTCGGGTGGG 509434 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || ||||||||| ||| | || | |||| | | | |||||||| | || || Sbjct 509435 ATGCCTTCCTTGTCC-TGAATCTTAGCCTTGACATTGTCTATGGTGTCGCTGGCCTCAAC 509493 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| | ||||| || |||||||| | ||||| |||||||| ||||| Sbjct 509494 ATCCAAGGTGATTGTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 509541 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| || ||||| || || |||||||| | || || || || Sbjct 547855 CGCAGCACCAAGTGCAGGGTCGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGACCG 547914 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || || ||||||||||||| ||| | || |||||| Sbjct 547915 TCCTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTG 547974 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | ||||| || | || ||||| | ||||| Sbjct 547975 TCCTGGATCTTAGCCTTGACATTGTCTATGGTGTCACTGGCCTCAACATCCAAGGTGATC 548034 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| | ||||| |||||||| ||||| Sbjct 548035 GTCTTCCCCGTCAAGGTCTTGACAAAGATCTGCAT 548069 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| |||| ||| ||||| || || |||||||| | || || ||| || Sbjct 493844 CGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGCCCG 493903 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| |||||||| || || ||||||||||||| ||| | || ||||| Sbjct 493904 TCCTCCAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTA 493963 Query 43089 TCCATGATTTTTTG-TTTGA 43107 ||| ||| | || | ||||| Sbjct 493964 TCC-TGAATCTTAGCTTTGA 493982 >seq662 Length=408752 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| ||||||| |||||| || | ||| ||||| || || || ||||| | Sbjct 149021 CCACCTCGCAAACGCAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTATAATCGGAA 148962 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| |||| || | |||||| |||||||| || | ||||||||||| | || Sbjct 148961 AGTGTCCTTCCGTCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGG 148902 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| ||| || |||| | | | |||||||| | || ||| Sbjct 148901 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAACA 148842 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||| || || |||||||| || ||||| || ||||| ||||| Sbjct 148841 TCCAACGTAATCGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 148795 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | |||| ||||| || || ||||| || | || |||| || Sbjct 148097 CGCAGCACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTCCTTCCG 148038 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || | ||||||||||| | || | || |||||| Sbjct 148037 TCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCTTCCTTG 147978 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||||| | || ||||| | ||| || Sbjct 147977 TCCTGGATCTTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAACATCCAACGTAATC 147918 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 147917 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 147883 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | |||| ||||| || || ||||| || | || |||| || Sbjct 148325 CGCAGCACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTCCTTCCG 148266 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || | ||||||||||| | || | || |||||| Sbjct 148265 TCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCTTCCTTG 148206 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||||| | || ||||| | ||| || Sbjct 148205 TCCTGGATCTTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAACATCCAACGTAATC 148146 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 148145 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 148111 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | |||| ||||| || || ||||| || | || |||| || Sbjct 148553 CGCAGCACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTCCTTCCG 148494 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || | ||||||||||| | || | || |||||| Sbjct 148493 TCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCTTCCTTG 148434 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||||| | || ||||| | ||| || Sbjct 148433 TCCTGGATCTTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAACATCCAACGTAATC 148374 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 148373 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 148339 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | |||| ||||| || || ||||| || | || |||| || Sbjct 148781 CGCAGCACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGCGTCCTTCCG 148722 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || | ||||||||||| | || | || |||||| Sbjct 148721 TCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCTTCCTTG 148662 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||||| | || ||||| | ||| || Sbjct 148661 TCCTGGATCTTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAACATCCAACGTAATC 148602 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 148601 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 148567 >seq97 Length=1148689 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | || ||||| || || |||||||| | ||| || || || Sbjct 996569 CGCAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGACAGGGTACGGCCG 996628 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || || ||||||||||||| ||| | || |||||| Sbjct 996629 TCTTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTG 996688 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || || || | ||||| Sbjct 996689 TCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCACTTGCCTCAACGTCCAAGGTGATC 996748 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| | ||||| |||||||| ||||| Sbjct 996749 GTCTTACCCGTCAAGGTCTTGACAAAGATCTGCAT 996783 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| || |||| |||||| || | || ||||| || || |||||||| | Sbjct 998977 CCGCCTCGCAAGCGCAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGAA 999036 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || |||| || | |||||| |||||||| || || ||||||||||||| ||| Sbjct 999037 AGGGTACGGCCGTCTTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 999096 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || ||||||||| ||| || |||| | | | |||||| || | || || Sbjct 999097 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCACTTGCCTCAACG 999156 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || ||||| | ||||| |||||||| ||||| Sbjct 999157 TCCAAGGTGATCGTCTTACCCGTCAAGGTCTTGACAAAGATCTGCAT 999203 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | || ||||| || || |||||||| | || || || || Sbjct 999217 CGCAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCG 999276 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || || ||||||||||||| ||| | || |||||| Sbjct 999277 TCTTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTG 999336 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || | || ||||| | || || Sbjct 999337 TCCTGGATCTTAGCCTTGACATTGTCGATCGTGTCACTTGCCTCAACATCCAAAGTAATC 999396 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| | ||||| |||||||| ||||| Sbjct 999397 GTCTTGCCCGTCAAGGTCTTGACAAAGATCTGCAT 999431 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||||| || | || ||||| || || |||||||| | ||| || || || Sbjct 996797 CGCAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCCGACAGGGTACGGCCG 996856 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || | |||||| |||||||| || || ||||||||||||| ||| | || |||||| Sbjct 996857 TCTTCCAACTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTG 996916 Query 43089 TCCATGATTTT 43099 || |||||| Sbjct 996917 TCTTGGATTTT 996927 >seq6891 Length=1358 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 42998 TTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAG 43057 |||||| | ||| || | || || ||| |||| ||||||||||| |||||||| || | Sbjct 284 TTGAATGTCGTAGTCTGACAAAGCCCGTCCGTCTTCTAGCTGCTTCCCAGCGAAAATCAA 343 Query 43058 TCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCA 43116 |||||||| |||| | |||| || |||| ||| | | || ||| | | |||| Sbjct 344 GCGCTGCTGATCGGGAGCGACGCCTTCGCGGTCC-TGAATCTGTGCTTTCAACTCGGCCA 402 Query 43117 CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGA 43176 | |||||||| ||| || || | | | |||||||||| |||||||| ||| | | Sbjct 403 CGGTGTCGCTTCCTTCTACGTCCAAGATCACCCTTTTGCCCGTGAGCGTCTTCACATACA 462 Query 43177 TTTG 43180 ||| Sbjct 463 CTTG 466 >seq465 Length=541741 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 42998 TTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAG 43057 |||||| | ||| || | || || ||| |||| ||||||||||| |||||||| || | Sbjct 164355 TTGAATGTCGTAGTCTGACAAAGCCCGTCCGTCTTCTAGCTGCTTCCCAGCGAAAATCAA 164296 Query 43058 TCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCA 43116 |||||||| |||| | |||| || |||| ||| | | || ||| | | |||| Sbjct 164295 GCGCTGCTGATCGGGAGCGACGCCTTCGCGGTCC-TGAATCTGTGCTTTCAACTCGGCCA 164237 Query 43117 CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGA 43176 | |||||||| ||| || || | | | |||||||||| |||||||| ||| | | Sbjct 164236 CGGTGTCGCTTCCTTCTACGTCCAAGATCACCCTTTTGCCCGTGAGCGTCTTCACATACA 164177 Query 43177 TTTG 43180 ||| Sbjct 164176 CTTG 164173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571748352888640